SMTL ID : 1xuo.1 (1 other biounit)

X-ray structure of LFA-1 I-domain bound to a 1,4-diazepane-2,5-dione inhibitor at 1.8A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: S.16, S.18, T.83, D.116 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.16, A:S.18, A:D.116, H2O.1, H2O.1

1 x LA1: (2R)-2-[3-ISOBUTYL-2,5-DIOXO-4-(QUINOLIN-3-YLMETHYL)-1,4-DIAZEPAN-1-YL]-N-METHYL-3-(2-NAPHTHYL)PROPANAMIDE(Non-covalent)

LA1.2: 14 residues within 4Å: Chain A: V.7, F.30, Y.43, V.110, I.112, I.132, Y.134, I.136, F.162, L.175, L.179, K.182, I.183, V.185 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:V.7, A:F.30, A:V.110, A:V.110, A:I.112, A:I.132, A:Y.134, A:Y.134, A:Y.134, A:I.136, A:L.175, A:L.179, A:L.179, A:I.183, A:V.185 Hydrogen bonds: A:K.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wattanasin, S. et al., 1,4-Diazepane-2,5-diones as novel inhibitors of LFA-1. Bioorg.Med.Chem.Lett. (2005)

Release Date

2005-10-26

Peptides

Integrin alpha-L: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Integrin alpha-L

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