SMTL ID : 1y1t.1

Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium at 1.77A Resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

homo-hexamer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: Y.172, S.173 Chain B: Q.209 Chain C: A.189 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.209 GOL.3: 4 residues within 4Å: Chain C: Y.172, S.173 Chain D: Q.209 Chain E: A.189 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:Q.209 GOL.5: 4 residues within 4Å: Chain A: A.189 Chain E: Y.172, S.173 Chain F: Q.209 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:Q.209

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: I.69, F.162, M.197 Chain B: H.8, R.48 4 PLIP interactions: 4 interactions with chain B Water bridges: B:R.48, B:R.48 Salt bridges: B:H.8, B:R.48 SO4.4: 5 residues within 4Å: Chain C: I.69, F.162, M.197 Chain D: H.8, R.48 4 PLIP interactions: 4 interactions with chain D Water bridges: D:R.48, D:R.48 Salt bridges: D:H.8, D:R.48 SO4.6: 5 residues within 4Å: Chain E: I.69, F.162, M.197 Chain F: H.8, R.48 4 PLIP interactions: 4 interactions with chain F Water bridges: F:R.48, F:R.48 Salt bridges: F:H.8, F:R.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gabdoulkhakov, A.G. et al., Crystal Structures of Salmonella Typhimurium Uridine Phosphorylase in Native and Three Complexes Forms - with Uridine, Uracil and Sulfate. To be Published

Release Date

2005-11-22

Peptides

Uridine phosphorylase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
F

C
A

D
F

E
A

F
F

Uridine phosphorylase

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