- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 24 x SO4: SULFATE ION(Non-functional Binders)
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.6: 32 residues within 4Å:- Chain A: I.8, G.9, G.11, P.12, S.13, L.31, E.32, R.33, Q.34, V.39, R.42, R.44, G.45, G.46, V.47, Q.102, V.127, C.158, D.159, G.160, G.163, I.164, Y.222, G.285, D.286, P.293, A.296, K.297, G.298, L.299, N.300
- Ligands: PHB.7
33 PLIP interactions:33 interactions with chain A- Hydrophobic interactions: A:Y.222, A:P.293
- Hydrogen bonds: A:A.10, A:S.13, A:S.13, A:S.13, A:R.33, A:R.33, A:R.42, A:R.42, A:R.44, A:G.46, A:V.47, A:V.47, A:Q.102, A:Q.102, A:D.286, A:L.299, A:N.300, A:N.300
- Water bridges: A:G.11, A:G.14, A:R.33, A:G.45, A:G.45, A:V.127, A:G.160, A:G.163, A:D.286, A:K.297, A:A.302
- Salt bridges: A:R.42, A:R.44
FAD.15: 33 residues within 4Å:- Chain B: I.8, G.9, G.11, P.12, S.13, L.31, E.32, R.33, Q.34, V.39, R.42, R.44, G.45, G.46, V.47, Q.102, V.127, C.158, D.159, G.160, G.163, I.164, Y.222, A.266, G.285, D.286, P.293, A.296, K.297, G.298, L.299, N.300
- Ligands: PHB.16
44 PLIP interactions:44 interactions with chain B- Hydrophobic interactions: B:Y.222, B:A.266, B:P.293
- Hydrogen bonds: B:S.13, B:S.13, B:S.13, B:R.33, B:R.33, B:R.42, B:R.42, B:R.44, B:G.46, B:V.47, B:V.47, B:Q.102, B:Q.102, B:I.164, B:D.286, B:G.298, B:L.299, B:N.300, B:N.300
- Water bridges: B:G.11, B:G.14, B:R.33, B:R.33, B:R.44, B:R.44, B:G.45, B:G.45, B:V.127, B:V.127, B:G.160, B:H.162, B:G.163, B:D.286, B:D.286, B:D.286, B:D.286, B:D.286, B:A.287, B:K.297, B:A.302
- Salt bridges: B:R.44
FAD.24: 32 residues within 4Å:- Chain C: I.8, G.9, G.11, P.12, S.13, L.31, E.32, R.33, Q.34, V.39, R.42, R.44, G.45, G.46, V.47, Q.102, V.127, C.158, D.159, G.160, G.163, I.164, Y.222, G.285, D.286, P.293, A.296, K.297, G.298, L.299, N.300
- Ligands: PHB.25
33 PLIP interactions:33 interactions with chain C- Hydrophobic interactions: C:Y.222, C:P.293
- Hydrogen bonds: C:A.10, C:S.13, C:S.13, C:S.13, C:R.33, C:R.33, C:R.42, C:R.42, C:R.44, C:G.46, C:V.47, C:V.47, C:Q.102, C:Q.102, C:D.286, C:L.299, C:N.300, C:N.300
- Water bridges: C:G.11, C:G.14, C:R.33, C:G.45, C:G.45, C:V.127, C:G.160, C:G.163, C:D.286, C:K.297, C:A.302
- Salt bridges: C:R.42, C:R.44
FAD.33: 33 residues within 4Å:- Chain D: I.8, G.9, G.11, P.12, S.13, L.31, E.32, R.33, Q.34, V.39, R.42, R.44, G.45, G.46, V.47, Q.102, V.127, C.158, D.159, G.160, G.163, I.164, Y.222, A.266, G.285, D.286, P.293, A.296, K.297, G.298, L.299, N.300
- Ligands: PHB.34
44 PLIP interactions:44 interactions with chain D- Hydrophobic interactions: D:Y.222, D:A.266, D:P.293
- Hydrogen bonds: D:S.13, D:S.13, D:S.13, D:R.33, D:R.33, D:R.42, D:R.42, D:R.44, D:G.46, D:V.47, D:V.47, D:Q.102, D:Q.102, D:I.164, D:D.286, D:G.298, D:L.299, D:N.300, D:N.300
- Water bridges: D:G.11, D:G.14, D:R.33, D:R.33, D:R.44, D:R.44, D:G.45, D:G.45, D:V.127, D:V.127, D:G.160, D:H.162, D:G.163, D:D.286, D:D.286, D:D.286, D:D.286, D:D.286, D:A.287, D:K.297, D:A.302
- Salt bridges: D:R.44
- 4 x PHB: P-HYDROXYBENZOIC ACID(Non-covalent)
PHB.7: 16 residues within 4Å:- Chain A: R.44, G.45, G.46, V.47, W.185, L.199, Y.201, L.210, S.212, R.214, R.220, Y.222, P.293, T.294, A.296
- Ligands: FAD.6
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:V.47, A:W.185, A:L.199, A:Y.222
- Hydrogen bonds: A:G.46, A:S.212, A:S.212, A:P.293, A:A.296
- Salt bridges: A:R.214
PHB.16: 15 residues within 4Å:- Chain B: R.44, G.45, G.46, V.47, W.185, Y.201, L.210, S.212, R.214, R.220, Y.222, P.293, T.294, A.296
- Ligands: FAD.15
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:V.47, B:W.185, B:L.210, B:Y.222
- Hydrogen bonds: B:G.46, B:Y.201, B:S.212, B:S.212, B:Y.222, B:P.293, B:A.296
- Salt bridges: B:R.214
PHB.25: 16 residues within 4Å:- Chain C: R.44, G.45, G.46, V.47, W.185, L.199, Y.201, L.210, S.212, R.214, R.220, Y.222, P.293, T.294, A.296
- Ligands: FAD.24
10 PLIP interactions:10 interactions with chain C- Hydrophobic interactions: C:V.47, C:W.185, C:L.199, C:Y.222
- Hydrogen bonds: C:G.46, C:S.212, C:S.212, C:P.293, C:A.296
- Salt bridges: C:R.214
PHB.34: 15 residues within 4Å:- Chain D: R.44, G.45, G.46, V.47, W.185, Y.201, L.210, S.212, R.214, R.220, Y.222, P.293, T.294, A.296
- Ligands: FAD.33
12 PLIP interactions:12 interactions with chain D- Hydrophobic interactions: D:V.47, D:W.185, D:L.210, D:Y.222
- Hydrogen bonds: D:G.46, D:Y.201, D:S.212, D:S.212, D:Y.222, D:P.293, D:A.296
- Salt bridges: D:R.214
- 4 x PSL: PYROSULFATE(Non-covalent)
PSL.17: 4 residues within 4Å:- Chain B: H.162, P.267, R.269
- Chain D: R.128
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain D- Water bridges: B:H.162, B:H.162, D:L.129, D:L.129
- Salt bridges: B:H.162, B:H.162, B:R.269, D:R.128
PSL.18: 7 residues within 4Å:- Chain B: R.33, A.125, E.126, R.128
- Chain D: R.33, Q.34
- Ligands: PSL.36
13 PLIP interactions:8 interactions with chain B, 5 interactions with chain D- Hydrogen bonds: B:E.126
- Water bridges: B:R.33, B:R.33, B:V.127, B:R.128, D:H.162, D:H.162, D:H.162
- Salt bridges: B:R.33, B:R.33, B:R.128, D:R.33, D:R.33
PSL.35: 4 residues within 4Å:- Chain B: R.128
- Chain D: H.162, P.267, R.269
8 PLIP interactions:3 interactions with chain B, 5 interactions with chain D- Water bridges: B:L.129, B:L.129, D:H.162, D:H.162
- Salt bridges: B:R.128, D:H.162, D:H.162, D:R.269
PSL.36: 7 residues within 4Å:- Chain B: R.33, Q.34
- Chain D: R.33, A.125, E.126, R.128
- Ligands: PSL.18
13 PLIP interactions:8 interactions with chain D, 5 interactions with chain B- Hydrogen bonds: D:E.126
- Water bridges: D:R.33, D:R.33, D:V.127, D:R.128, B:H.162, B:H.162, B:H.162
- Salt bridges: D:R.33, D:R.33, D:R.128, B:R.33, B:R.33
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cole, L.J. et al., Removal of a methyl group causes global changes in p-hydroxybenzoate hydroxylase. Biochemistry (2005)
- Release Date
- 2005-07-26
- Peptides
- P-hydroxybenzoate hydroxylase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 24 x SO4: SULFATE ION(Non-functional Binders)
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 4 x PHB: P-HYDROXYBENZOIC ACID(Non-covalent)
- 4 x PSL: PYROSULFATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cole, L.J. et al., Removal of a methyl group causes global changes in p-hydroxybenzoate hydroxylase. Biochemistry (2005)
- Release Date
- 2005-07-26
- Peptides
- P-hydroxybenzoate hydroxylase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B