SMTL ID : 1z71.1

thrombin and P2 pyridine N-oxide inhibitor complex structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x L17: L17(Non-covalent)

L17.1: 20 residues within 4Å: Chain A: H.72, Y.76, W.79, E.123, N.124, L.125, I.208, D.228, A.229, C.230, E.231, S.234, V.254, S.255, W.256, G.257, E.258, G.259, G.267, F.268 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.76, A:W.79, A:L.125, A:V.254, A:W.256 Hydrogen bonds: A:S.255, A:G.257, A:G.257, A:G.257

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nantermet, P.G. et al., P(2) pyridine N-oxide thrombin inhibitors: a novel peptidomimetic scaffold. BIOORG.MED.CHEM.LETT. (2005)

Release Date

2005-05-17

Peptides

thrombin: A
Hirudin IIIB': B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

thrombin

Hirudin IIIB'

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