SMTL ID : 1zar.1

Crystal Structure of A.fulgidus Rio2 Kinase Complexed With ADP and Manganese Ions

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 3 residues within 4Å: Chain A: N.223, D.235 Ligands: ADP.2 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.235, H2O.1, H2O.4

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 17 residues within 4Å: Chain A: M.98, E.103, S.104, V.106, V.118, K.120, P.167, M.179, E.180, L.181, I.182, E.186, Y.222, N.223, I.234, D.235 Ligands: MN.1 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:E.103, A:S.104, A:E.180, A:I.182, A:E.186 Water bridges: A:G.101, A:S.104, A:S.104, A:E.186, A:E.186, A:E.186, A:Y.222, A:D.235 Salt bridges: A:K.120, A:K.120

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 9 residues within 4Å: Chain A: N.153, R.156, A.157, K.160, I.214, S.239, V.240, E.241, E.244 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.153, A:E.244 EDO.4: 6 residues within 4Å: Chain A: Q.162, G.163, L.164, V.166, P.167, K.168 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.163, A:G.163, A:P.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Laronde-Leblanc, N. et al., Autophosphorylation of Archaeoglobus fulgidus Rio2 and crystal structures of its nucleotide-metal ion complexes. Febs J. (2005)

Release Date

2005-06-21

Peptides

Rio2 kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Rio2 kinase

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