- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
UDP.2: 15 residues within 4Å:- Chain A: L.29, T.30, T.31, N.32, Y.35, V.102, D.122, A.123, D.124, H.232, L.234, G.235, K.238
- Chain C: H.256
- Ligands: MN.1
19 PLIP interactions:18 interactions with chain A, 1 interactions with chain C- Hydrophobic interactions: A:V.102
- Hydrogen bonds: A:L.29, A:L.29, A:T.31, A:T.31, A:T.31, A:N.32, A:Y.35, A:Y.35, A:A.123, A:D.124, A:D.124, A:G.235, C:H.256
- Water bridges: A:N.153
- Salt bridges: A:H.232, A:K.238, A:K.238
- pi-Stacking: A:Y.35
UDP.4: 15 residues within 4Å:- Chain B: L.29, T.30, T.31, N.32, Y.35, V.102, D.122, A.123, D.124, H.232, L.234, G.235, K.238
- Chain D: H.256
- Ligands: MN.3
16 PLIP interactions:16 interactions with chain B- Hydrophobic interactions: B:V.102
- Hydrogen bonds: B:L.29, B:L.29, B:T.31, B:T.31, B:N.32, B:Y.35, B:A.123, B:D.124, B:D.124, B:G.235
- Water bridges: B:N.153
- Salt bridges: B:H.232, B:K.238, B:K.238
- pi-Stacking: B:Y.35
UDP.6: 15 residues within 4Å:- Chain A: H.256
- Chain C: L.29, T.30, T.31, N.32, Y.35, V.102, D.122, A.123, D.124, H.232, L.234, G.235, K.238
- Ligands: MN.5
19 PLIP interactions:18 interactions with chain C, 1 interactions with chain A- Hydrophobic interactions: C:V.102
- Hydrogen bonds: C:L.29, C:L.29, C:T.31, C:T.31, C:T.31, C:N.32, C:Y.35, C:Y.35, C:A.123, C:D.124, C:D.124, C:G.235, A:H.256
- Water bridges: C:N.153
- Salt bridges: C:H.232, C:K.238, C:K.238
- pi-Stacking: C:Y.35
UDP.8: 15 residues within 4Å:- Chain B: H.256
- Chain D: L.29, T.30, T.31, N.32, Y.35, V.102, D.122, A.123, D.124, H.232, L.234, G.235, K.238
- Ligands: MN.7
16 PLIP interactions:16 interactions with chain D- Hydrophobic interactions: D:V.102
- Hydrogen bonds: D:L.29, D:L.29, D:T.31, D:T.31, D:N.32, D:Y.35, D:A.123, D:D.124, D:D.124, D:G.235
- Water bridges: D:N.153
- Salt bridges: D:H.232, D:K.238, D:K.238
- pi-Stacking: D:Y.35
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hurley, T.D. et al., Requirements for catalysis in mammalian glycogenin. J.Biol.Chem. (2005)
- Release Date
- 2005-04-26
- Peptides
- Glycogenin-1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hurley, T.D. et al., Requirements for catalysis in mammalian glycogenin. J.Biol.Chem. (2005)
- Release Date
- 2005-04-26
- Peptides
- Glycogenin-1: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B