SMTL ID : 1zmh.1 (3 other biounits)

Crystal structure of human neutrophil peptide 2, HNP-2 (variant Gly16-> D-Ala)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain B: R.13, Y.15 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.13

1 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.2: 11 residues within 4Å: Chain A: C.1, Y.2, C.3, W.25, F.27 Chain B: C.1, Y.2, C.3, Y.20, W.25, F.27 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:C.3, A:C.3 Water bridges: B:Y.2

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain B: R.14, T.17 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.14, B:R.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, C. et al., Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids. J.Biol.Chem. (2005)

Release Date

2005-08-16

Peptides

Neutrophil defensin 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Neutrophil defensin 2

Related Entries With Identical Sequence