SMTL ID : 1zmh.2 (3 other biounits)

Crystal structure of human neutrophil peptide 2, HNP-2 (variant Gly16-> D-Ala)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.13, R.14 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.14 SO4.2: 1 residues within 4Å: Chain A: Y.15 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain A: C.3 Chain B: Y.15, F.27 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:Y.15, A:C.3 Water bridges: A:C.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, C. et al., Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids. J.Biol.Chem. (2005)

Release Date

2005-08-16

Peptides

Neutrophil defensin 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Neutrophil defensin 2

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