SMTL ID : 1zmn.1

Crystal Structure of the Catalytic Domain of Coagulation Factor XI in Complex with (R)-1-(4-(4-(hydroxymethyl)-1,3,2-dioxaborolan-2-yl)phenyl)guanidine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: Y.134, K.185 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.134 Salt bridges: A:K.185 SO4.2: 3 residues within 4Å: Chain A: Q.37, Q.77, K.98 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.37, A:Q.37, A:Q.77 Salt bridges: A:K.98 SO4.3: 4 residues within 4Å: Chain A: H.82, Q.84, Y.227, W.230 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.84 Water bridges: A:W.230, A:W.230 Salt bridges: A:H.82

1 x 427: (R)-1-(4-(4-(HYDROXYMETHYL)-1,3,2-DIOXABOROLAN-2-YL)PHENYL)GUANIDINE(Covalent)

427.4: 14 residues within 4Å: Chain A: H.44, D.182, A.183, C.184, K.185, G.186, D.187, S.188, T.206, S.207, W.208, G.209, G.211, C.212 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:T.206 Hydrogen bonds: A:G.186, A:D.187, A:S.188, A:G.211, A:G.211 Water bridges: A:R.26, A:A.183, A:G.209, A:E.210 Salt bridges: A:D.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lazarova, T.I. et al., Synthesis and in vitro biological evaluation of aryl boronic acids as potential inhibitors of factor XIa. Bioorg.Med.Chem.Lett. (2006)

Release Date

2006-05-09

Peptides

Coagulation factor XI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Coagulation factor XI

Related Entries With Identical Sequence