SMTL ID : 1zom.1

Crystal Structure of the Catalytic Domain of Coagulation Factor XI in complex with a peptidomimetic Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: Q.37, Q.77, K.98 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.37, A:Q.77, A:Q.77 Salt bridges: A:K.98

1 x 339: (S)-2-(3-((R)-1-(4-BROMOPHENYL)ETHYL)UREIDO)-N-((S)-1-((S)-5-GUANIDINO-1-OXO-1-(THIAZOL-2-YL)PENTAN-2-YLAMINO)-3-METHYL-1-OXOBUTAN-2-YL)-5-UREIDOPENTANAMIDE(Covalent)

339.2: 18 residues within 4Å: Chain A: H.44, A.88, E.89, H.165, D.182, A.183, C.184, K.185, G.186, D.187, S.188, S.207, W.208, G.209, E.210, G.211, C.212, G.219 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:A.88, A:K.185 Hydrogen bonds: A:A.183, A:K.185, A:G.186, A:D.187, A:S.188, A:S.188, A:S.207, A:G.209, A:E.210, A:E.210, A:G.211 Water bridges: A:W.208, A:Y.221 Salt bridges: A:D.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, J. et al., Design, synthesis, and biological evaluation of peptidomimetic inhibitors of factor XIa as novel anticoagulants. J.Med.Chem. (2006)

Release Date

2006-05-23

Peptides

Coagulation factor XI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Coagulation factor XI

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