SMTL ID : 1zsj.1

Crystal Structure of the Catalytic Domain of Coagulation Factor XI in complex with N-(7-Carbamimidoyl-naphthalen-1-yl)-3-hydroxy-2-methyl-benzamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: Y.134, K.185 Ligands: 709.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.134, A:Y.134 Salt bridges: A:K.185

1 x BCT: BICARBONATE ION(Non-functional Binders)

BCT.2: 5 residues within 4Å: Chain A: L.28, K.185, G.186, S.188 Ligands: 709.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.28, A:G.186, A:S.188

1 x 709: N-(7-CARBAMIMIDOYL-NAPHTHALEN-1-YL)-3-HYDROXY-2-METHYL-BENZAMIDE(Non-covalent)

709.3: 15 residues within 4Å: Chain A: L.137, D.182, A.183, C.184, K.185, S.188, T.206, W.208, G.209, E.210, G.211, C.212, G.219 Ligands: SO4.1, BCT.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.137, A:K.185, A:K.185, A:T.206 Hydrogen bonds: A:D.182, A:A.183, A:G.209, A:G.211, A:G.211 Water bridges: A:W.208, A:G.209, A:E.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, Z. et al., Synthesis and Optimization of Potent and Selective Inhibitors for Human Factor XIa: Substituted Naphthamidine Series. To be Published

Release Date

2006-05-23

Peptides

Coagulation factor XI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Coagulation factor XI

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