SMTL ID : 25c8.1

CATALYTIC ANTIBODY 5C8, FAB-HAPTEN COMPLEX

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GEP: N-METHYL-N-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM ION(Non-covalent)

GEP.1: 16 residues within 4Å: Chain A: H.35, Y.37, L.47, Y.50, H.90, Y.92 Chain B: H.35, A.97, A.98, D.99, P.100, G.104, H.105, G.106, D.107, W.109 10 PLIP interactions: 3 interactions with chain B, 7 interactions with chain A Hydrophobic interactions: B:W.109, A:Y.50, A:Y.50, A:Y.92 Salt bridges: B:D.99, B:D.107 Water bridges: A:S.57, A:S.57 pi-Stacking: A:H.35 pi-Cation interactions: A:Y.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gruber, K. et al., Structural basis for antibody catalysis of a disfavored ring closure reaction. Biochemistry (1999)

Release Date

1999-03-23

Peptides

IGG 5C8: A
IGG 5C8: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

IGG 5C8

IGG 5C8

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