SMTL ID : 2a2m.1

CRYSTAL STRUCTURE OF a putativeTenA family transcriptional regulator (BT_3146) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 1.88 A RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

homo-hexamer

Ligands

15 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 5 residues within 4Å: Chain A: N.56, G.57, L.59, D.60 Chain D: N.56 Ligand excluded by PLIP ACT.2: 6 residues within 4Å: Chain A: Y.84, W.180, W.200, W.203, N.204 Ligands: EDO.6 Ligand excluded by PLIP ACT.3: 3 residues within 4Å: Chain A: V.44, W.52, Y.212 Ligand excluded by PLIP ACT.12: 8 residues within 4Å: Chain B: Y.84, M.88, Y.128, W.180, W.200, W.203, N.204 Ligands: EDO.16 Ligand excluded by PLIP ACT.13: 2 residues within 4Å: Chain B: D.69, T.249 Ligand excluded by PLIP ACT.18: 5 residues within 4Å: Chain C: N.56, G.57, L.59, D.60 Chain F: N.56 Ligand excluded by PLIP ACT.19: 6 residues within 4Å: Chain C: Y.84, W.180, W.200, W.203, N.204 Ligands: EDO.23 Ligand excluded by PLIP ACT.20: 3 residues within 4Å: Chain C: V.44, W.52, Y.212 Ligand excluded by PLIP ACT.29: 8 residues within 4Å: Chain D: Y.84, M.88, Y.128, W.180, W.200, W.203, N.204 Ligands: EDO.33 Ligand excluded by PLIP ACT.30: 2 residues within 4Å: Chain D: D.69, T.249 Ligand excluded by PLIP ACT.35: 5 residues within 4Å: Chain B: N.56 Chain E: N.56, G.57, L.59, D.60 Ligand excluded by PLIP ACT.36: 6 residues within 4Å: Chain E: Y.84, W.180, W.200, W.203, N.204 Ligands: EDO.40 Ligand excluded by PLIP ACT.37: 3 residues within 4Å: Chain E: V.44, W.52, Y.212 Ligand excluded by PLIP ACT.46: 8 residues within 4Å: Chain F: Y.84, M.88, Y.128, W.180, W.200, W.203, N.204 Ligands: EDO.50 Ligand excluded by PLIP ACT.47: 2 residues within 4Å: Chain F: D.69, T.249 Ligand excluded by PLIP

36 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 6 residues within 4Å: Chain A: R.36, T.39, L.40, T.113, M.217, Q.220 Ligand excluded by PLIP EDO.5: 9 residues within 4Å: Chain A: D.91, Y.94, I.150, Y.153, C.176, W.180, E.241, V.244, F.245 Ligand excluded by PLIP EDO.6: 8 residues within 4Å: Chain A: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligands: ACT.2 Ligand excluded by PLIP EDO.7: 8 residues within 4Å: Chain A: K.23, R.24, P.181, N.204, G.205, G.206, T.207, P.208 Ligand excluded by PLIP EDO.8: 3 residues within 4Å: Chain A: A.106, R.115, K.119 Ligand excluded by PLIP EDO.9: 5 residues within 4Å: Chain A: G.57, S.58, D.60, T.61, N.235 Ligand excluded by PLIP EDO.10: 6 residues within 4Å: Chain A: D.60, V.63, Q.64 Chain D: W.55, L.59, W.182 Ligand excluded by PLIP EDO.11: 4 residues within 4Å: Chain A: Y.93, R.97, A.141, S.142 Ligand excluded by PLIP EDO.14: 8 residues within 4Å: Chain B: D.91, Y.94, I.150, Y.153, C.176, W.180, E.241, V.244 Ligand excluded by PLIP EDO.15: 6 residues within 4Å: Chain B: R.36, T.39, L.40, T.113, M.217, Q.220 Ligand excluded by PLIP EDO.16: 8 residues within 4Å: Chain B: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligands: ACT.12 Ligand excluded by PLIP EDO.17: 3 residues within 4Å: Chain B: D.188, G.189 Chain E: K.72 Ligand excluded by PLIP EDO.21: 6 residues within 4Å: Chain C: R.36, T.39, L.40, T.113, M.217, Q.220 Ligand excluded by PLIP EDO.22: 9 residues within 4Å: Chain C: D.91, Y.94, I.150, Y.153, C.176, W.180, E.241, V.244, F.245 Ligand excluded by PLIP EDO.23: 8 residues within 4Å: Chain C: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligands: ACT.19 Ligand excluded by PLIP EDO.24: 8 residues within 4Å: Chain C: K.23, R.24, P.181, N.204, G.205, G.206, T.207, P.208 Ligand excluded by PLIP EDO.25: 3 residues within 4Å: Chain C: A.106, R.115, K.119 Ligand excluded by PLIP EDO.26: 5 residues within 4Å: Chain C: G.57, S.58, D.60, T.61, N.235 Ligand excluded by PLIP EDO.27: 6 residues within 4Å: Chain C: D.60, V.63, Q.64 Chain F: W.55, L.59, W.182 Ligand excluded by PLIP EDO.28: 4 residues within 4Å: Chain C: Y.93, R.97, A.141, S.142 Ligand excluded by PLIP EDO.31: 8 residues within 4Å: Chain D: D.91, Y.94, I.150, Y.153, C.176, W.180, E.241, V.244 Ligand excluded by PLIP EDO.32: 6 residues within 4Å: Chain D: R.36, T.39, L.40, T.113, M.217, Q.220 Ligand excluded by PLIP EDO.33: 8 residues within 4Å: Chain D: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligands: ACT.29 Ligand excluded by PLIP EDO.34: 3 residues within 4Å: Chain A: K.72 Chain D: D.188, G.189 Ligand excluded by PLIP EDO.38: 6 residues within 4Å: Chain E: R.36, T.39, L.40, T.113, M.217, Q.220 Ligand excluded by PLIP EDO.39: 9 residues within 4Å: Chain E: D.91, Y.94, I.150, Y.153, C.176, W.180, E.241, V.244, F.245 Ligand excluded by PLIP EDO.40: 8 residues within 4Å: Chain E: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligands: ACT.36 Ligand excluded by PLIP EDO.41: 8 residues within 4Å: Chain E: K.23, R.24, P.181, N.204, G.205, G.206, T.207, P.208 Ligand excluded by PLIP EDO.42: 3 residues within 4Å: Chain E: A.106, R.115, K.119 Ligand excluded by PLIP EDO.43: 5 residues within 4Å: Chain E: G.57, S.58, D.60, T.61, N.235 Ligand excluded by PLIP EDO.44: 6 residues within 4Å: Chain B: W.55, L.59, W.182 Chain E: D.60, V.63, Q.64 Ligand excluded by PLIP EDO.45: 4 residues within 4Å: Chain E: Y.93, R.97, A.141, S.142 Ligand excluded by PLIP EDO.48: 8 residues within 4Å: Chain F: D.91, Y.94, I.150, Y.153, C.176, W.180, E.241, V.244 Ligand excluded by PLIP EDO.49: 6 residues within 4Å: Chain F: R.36, T.39, L.40, T.113, M.217, Q.220 Ligand excluded by PLIP EDO.50: 8 residues within 4Å: Chain F: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligands: ACT.46 Ligand excluded by PLIP EDO.51: 3 residues within 4Å: Chain C: K.72 Chain F: D.188, G.189 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of (np_812058.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.88 A resolution. To be published

Release Date

2005-08-09

Peptides

hypothetical protein BT3146: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

hypothetical protein BT3146

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