SMTL ID : 2a2o.1 (1 other biounit)

CRYSTAL STRUCTURE OF a putativeTenA family transcriptional regulator (BT_3146) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.16 A RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

homo-hexamer

Ligands

24 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: R.22, R.24, Y.128, W.180, W.200, W.203, N.204 Ligands: EDO.2 Ligand excluded by PLIP EDO.2: 8 residues within 4Å: Chain A: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligands: EDO.1 Ligand excluded by PLIP EDO.3: 8 residues within 4Å: Chain A: D.91, Y.94, I.150, C.176, W.180, E.241, V.244, F.245 Ligand excluded by PLIP EDO.4: 4 residues within 4Å: Chain A: T.236, N.239, Y.240, K.243 Ligand excluded by PLIP EDO.5: 6 residues within 4Å: Chain A: K.41, D.43, V.44, P.45, A.46, N.216 Ligand excluded by PLIP EDO.8: 7 residues within 4Å: Chain B: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligand excluded by PLIP EDO.9: 8 residues within 4Å: Chain B: D.91, Y.94, I.150, C.176, W.180, E.241, V.244, F.245 Ligand excluded by PLIP EDO.11: 7 residues within 4Å: Chain C: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligand excluded by PLIP EDO.12: 9 residues within 4Å: Chain C: D.91, Y.94, I.150, Y.153, C.176, W.180, E.241, V.244, F.245 Ligand excluded by PLIP EDO.13: 5 residues within 4Å: Chain C: R.36, T.39, L.40, T.113, Q.220 Ligand excluded by PLIP EDO.16: 8 residues within 4Å: Chain D: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligands: K.15 Ligand excluded by PLIP EDO.17: 9 residues within 4Å: Chain D: D.91, Y.94, I.150, Y.153, C.176, W.180, E.241, V.244, F.245 Ligand excluded by PLIP EDO.18: 2 residues within 4Å: Chain D: E.112, R.115 Ligand excluded by PLIP EDO.19: 5 residues within 4Å: Chain D: R.36, T.39, L.40, T.113, Q.220 Ligand excluded by PLIP EDO.21: 8 residues within 4Å: Chain E: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligands: EDO.23 Ligand excluded by PLIP EDO.22: 9 residues within 4Å: Chain E: D.91, Y.94, I.150, Y.153, C.176, W.180, E.241, V.244, F.245 Ligand excluded by PLIP EDO.23: 6 residues within 4Å: Chain E: R.22, R.24, Y.128, W.203, N.204 Ligands: EDO.21 Ligand excluded by PLIP EDO.24: 6 residues within 4Å: Chain E: R.36, T.39, L.40, T.113, M.217, Q.220 Ligand excluded by PLIP EDO.25: 5 residues within 4Å: Chain E: Y.178, W.182, N.185, P.208, Y.212 Ligand excluded by PLIP EDO.27: 9 residues within 4Å: Chain F: D.91, Y.94, I.150, Y.153, C.176, W.180, E.241, V.244, F.245 Ligand excluded by PLIP EDO.28: 5 residues within 4Å: Chain A: A.75, A.76, Y.190 Chain F: Y.190, P.192 Ligand excluded by PLIP EDO.29: 5 residues within 4Å: Chain F: R.36, T.39, L.40, T.113, Q.220 Ligand excluded by PLIP EDO.30: 7 residues within 4Å: Chain F: Y.70, Y.84, L.87, M.88, D.91, W.180, W.200 Ligand excluded by PLIP EDO.31: 4 residues within 4Å: Chain F: D.149, K.243, T.246, S.247 Ligand excluded by PLIP

7 x K: POTASSIUM ION(Non-covalent)

K.6: 3 residues within 4Å: Chain B: R.36, T.39, Q.220 No protein-ligand interaction detected (PLIP) K.7: 6 residues within 4Å: Chain A: E.140, S.142, G.143 Chain B: E.140, S.142, G.143 No protein-ligand interaction detected (PLIP) K.10: 1 residues within 4Å: Chain C: N.204 No protein-ligand interaction detected (PLIP) K.14: 6 residues within 4Å: Chain C: E.140, S.142, G.143 Chain D: E.140, S.142, G.143 No protein-ligand interaction detected (PLIP) K.15: 4 residues within 4Å: Chain D: W.180, W.200, N.204 Ligands: EDO.16 No protein-ligand interaction detected (PLIP) K.20: 6 residues within 4Å: Chain E: E.140, S.142, G.143 Chain F: E.140, S.142, G.143 No protein-ligand interaction detected (PLIP) K.26: 1 residues within 4Å: Chain F: N.204 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of (np_812058.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.16 A resolution. To be published

Release Date

2005-07-26

Peptides

hypothetical protein BT3146: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

hypothetical protein BT3146

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