SMTL ID : 2acl.6 (5 other biounits)

Liver X-Receptor alpha Ligand Binding Domain with SB313987

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-2-2-mer

Ligands

2 x REA: RETINOIC ACID(Non-covalent)

REA.1: 13 residues within 4Å: Chain A: I.44, A.47, A.48, Q.51, N.82, L.85, F.89, R.92, L.102, A.103, I.121, C.208 Chain C: L.212 11 PLIP interactions: 10 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:A.48, A:N.82, A:L.85, A:F.89, A:F.89, A:F.89, A:L.102, A:I.121, C:L.212 Hydrogen bonds: A:A.103 Salt bridges: A:R.92 REA.3: 12 residues within 4Å: Chain C: I.44, A.47, A.48, Q.51, N.82, L.85, F.89, R.92, L.102, A.103, I.121, C.208 11 PLIP interactions: 11 interactions with chain C Hydrophobic interactions: C:I.44, C:A.47, C:A.48, C:N.82, C:L.85, C:F.89, C:F.89, C:F.89, C:I.121 Hydrogen bonds: C:A.103 Salt bridges: C:R.92

2 x L05: 1-BENZYL-3-(4-METHOXYPHENYLAMINO)-4-PHENYLPYRROLE-2,5-DIONE(Non-covalent)

L05.2: 20 residues within 4Å: Chain B: F.51, F.54, T.55, L.57, A.58, S.61, I.92, M.95, L.96, T.99, F.112, F.123, A.126, G.127, L.128, F.132, H.218, Q.221, L.225, W.240 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:F.51, B:L.57, B:A.58, B:I.92, B:M.95, B:L.96, B:F.112, B:F.123, B:L.128, B:L.128, B:Q.221, B:L.225 Hydrogen bonds: B:F.54, B:S.61 L05.4: 20 residues within 4Å: Chain D: F.51, F.54, T.55, L.57, A.58, S.61, I.92, M.95, T.99, F.112, F.123, A.126, G.127, L.128, F.132, H.218, Q.221, L.225, L.232, W.240 14 PLIP interactions: 14 interactions with chain D Hydrophobic interactions: D:F.51, D:L.57, D:A.58, D:I.92, D:F.112, D:F.123, D:L.128, D:Q.221, D:L.225, D:L.225, D:L.225 Hydrogen bonds: D:F.54, D:A.58, D:S.61

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jaye, M.C. et al., Discovery of substituted maleimides as liver x receptor agonists and determination of a ligand-bound crystal structure. J.Med.Chem. (2005)

Release Date

2005-09-20

Peptides

Retinoic acid receptor RXR-alpha: AC
Oxysterols receptor LXR-alpha: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
E

B
B

D
F

Retinoic acid receptor RXR-alpha

Oxysterols receptor LXR-alpha

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