- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.56 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 7 residues within 4Å:- Chain A: K.112, L.173, H.174, W.175, W.297, H.298
- Chain E: N.231
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain E- Hydrogen bonds: A:W.175, E:N.231
- Water bridges: A:K.112, A:K.112, A:W.175, A:H.298
- Salt bridges: A:K.112, A:H.174, A:H.298
SO4.5: 5 residues within 4Å:- Chain B: K.112, L.173, H.174, W.175
- Chain D: K.8
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain D- Hydrogen bonds: B:W.175
- Water bridges: B:K.112, D:N.9, D:N.9
- Salt bridges: B:K.112, D:K.8
SO4.8: 7 residues within 4Å:- Chain A: N.231
- Chain C: K.112, L.173, H.174, W.175, W.297, H.298
9 PLIP interactions:8 interactions with chain C, 1 interactions with chain A- Hydrogen bonds: C:W.175, A:N.231
- Water bridges: C:K.112, C:K.112, C:W.175, C:H.298
- Salt bridges: C:K.112, C:H.174, C:H.298
SO4.11: 5 residues within 4Å:- Chain D: K.112, L.173, H.174, W.175
- Chain F: K.8
6 PLIP interactions:3 interactions with chain D, 3 interactions with chain F- Hydrogen bonds: D:W.175
- Water bridges: D:K.112, F:N.9, F:N.9
- Salt bridges: D:K.112, F:K.8
SO4.14: 7 residues within 4Å:- Chain C: N.231
- Chain E: K.112, L.173, H.174, W.175, W.297, H.298
9 PLIP interactions:8 interactions with chain E, 1 interactions with chain C- Hydrogen bonds: E:W.175, C:N.231
- Water bridges: E:K.112, E:K.112, E:W.175, E:H.298
- Salt bridges: E:K.112, E:H.174, E:H.298
SO4.17: 5 residues within 4Å:- Chain B: K.8
- Chain F: K.112, L.173, H.174, W.175
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain F- Water bridges: B:N.9, B:N.9, F:K.112
- Salt bridges: B:K.8, F:K.112
- Hydrogen bonds: F:W.175
- 6 x AHN: N-[2-(1H-IMIDAZOL-4-YL)ETHYL]ACETAMIDE(Non-covalent)
AHN.3: 11 residues within 4Å:- Chain A: D.127, E.169, E.170, D.216, L.217, I.271, Q.272, F.293, W.297, H.298
- Ligands: ZN.1
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:F.293
- Hydrogen bonds: A:Q.272, A:Q.272
AHN.6: 11 residues within 4Å:- Chain B: D.127, E.169, E.170, D.216, L.217, I.271, Q.272, F.293, W.297, H.298
- Ligands: ZN.4
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:F.293
- Hydrogen bonds: B:Q.272, B:Q.272
AHN.9: 11 residues within 4Å:- Chain C: D.127, E.169, E.170, D.216, L.217, I.271, Q.272, F.293, W.297, H.298
- Ligands: ZN.7
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:F.293
- Hydrogen bonds: C:Q.272, C:Q.272
AHN.12: 11 residues within 4Å:- Chain D: D.127, E.169, E.170, D.216, L.217, I.271, Q.272, F.293, W.297, H.298
- Ligands: ZN.10
3 PLIP interactions:3 interactions with chain D- Hydrophobic interactions: D:F.293
- Hydrogen bonds: D:Q.272, D:Q.272
AHN.15: 11 residues within 4Å:- Chain E: D.127, E.169, E.170, D.216, L.217, I.271, Q.272, F.293, W.297, H.298
- Ligands: ZN.13
3 PLIP interactions:3 interactions with chain E- Hydrophobic interactions: E:F.293
- Hydrogen bonds: E:Q.272, E:Q.272
AHN.18: 11 residues within 4Å:- Chain F: D.127, E.169, E.170, D.216, L.217, I.271, Q.272, F.293, W.297, H.298
- Ligands: ZN.16
3 PLIP interactions:3 interactions with chain F- Hydrophobic interactions: F:F.293
- Hydrogen bonds: F:Q.272, F:Q.272
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Huang, K.F. et al., Crystal structures of human glutaminyl cyclase, an enzyme responsible for protein N-terminal pyroglutamate formation. Proc.Natl.Acad.Sci.Usa (2005)
- Release Date
- 2005-08-23
- Peptides
- Glutaminyl-peptide cyclotransferase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.56 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 6 x AHN: N-[2-(1H-IMIDAZOL-4-YL)ETHYL]ACETAMIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Huang, K.F. et al., Crystal structures of human glutaminyl cyclase, an enzyme responsible for protein N-terminal pyroglutamate formation. Proc.Natl.Acad.Sci.Usa (2005)
- Release Date
- 2005-08-23
- Peptides
- Glutaminyl-peptide cyclotransferase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B