- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.68 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 7 residues within 4Å:- Chain A: K.112, L.173, H.174, W.175, W.297, H.298
- Chain E: N.231
10 PLIP interactions:9 interactions with chain A, 1 interactions with chain E- Hydrogen bonds: A:W.175, E:N.231
- Water bridges: A:K.112, A:K.112, A:H.174, A:W.175, A:H.298
- Salt bridges: A:K.112, A:H.174, A:H.298
SO4.5: 5 residues within 4Å:- Chain B: K.112, L.173, H.174, W.175
- Chain D: K.8
6 PLIP interactions:4 interactions with chain B, 2 interactions with chain D- Hydrogen bonds: B:W.175
- Water bridges: B:K.112, D:N.9
- Salt bridges: B:K.112, B:H.174, D:K.8
SO4.8: 7 residues within 4Å:- Chain A: N.231
- Chain C: K.112, L.173, H.174, W.175, W.297, H.298
10 PLIP interactions:9 interactions with chain C, 1 interactions with chain A- Hydrogen bonds: C:W.175, A:N.231
- Water bridges: C:K.112, C:K.112, C:H.174, C:W.175, C:H.298
- Salt bridges: C:K.112, C:H.174, C:H.298
SO4.11: 5 residues within 4Å:- Chain D: K.112, L.173, H.174, W.175
- Chain F: K.8
6 PLIP interactions:4 interactions with chain D, 2 interactions with chain F- Hydrogen bonds: D:W.175
- Water bridges: D:K.112, F:N.9
- Salt bridges: D:K.112, D:H.174, F:K.8
SO4.14: 7 residues within 4Å:- Chain C: N.231
- Chain E: K.112, L.173, H.174, W.175, W.297, H.298
10 PLIP interactions:9 interactions with chain E, 1 interactions with chain C- Hydrogen bonds: E:W.175, C:N.231
- Water bridges: E:K.112, E:K.112, E:H.174, E:W.175, E:H.298
- Salt bridges: E:K.112, E:H.174, E:H.298
SO4.17: 5 residues within 4Å:- Chain B: K.8
- Chain F: K.112, L.173, H.174, W.175
6 PLIP interactions:2 interactions with chain B, 4 interactions with chain F- Water bridges: B:N.9, F:K.112
- Salt bridges: B:K.8, F:K.112, F:H.174
- Hydrogen bonds: F:W.175
- 6 x NVI: 1-VINYLIMIDAZOLE(Non-covalent)
NVI.3: 13 residues within 4Å:- Chain A: D.127, E.169, E.170, D.216, L.217, I.271, Q.272, D.273, I.289, F.293, W.297, H.298
- Ligands: ZN.1
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:I.271, A:D.273, A:I.289, A:F.293
- pi-Stacking: A:W.297
NVI.6: 13 residues within 4Å:- Chain B: D.127, E.169, E.170, W.175, D.216, L.217, I.271, Q.272, D.273, I.289, W.297, H.298
- Ligands: ZN.4
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:I.271, B:D.273, B:I.289
- pi-Stacking: B:W.297
NVI.9: 13 residues within 4Å:- Chain C: D.127, E.169, E.170, D.216, L.217, I.271, Q.272, D.273, I.289, F.293, W.297, H.298
- Ligands: ZN.7
5 PLIP interactions:5 interactions with chain C- Hydrophobic interactions: C:I.271, C:D.273, C:I.289, C:F.293
- pi-Stacking: C:W.297
NVI.12: 13 residues within 4Å:- Chain D: D.127, E.169, E.170, W.175, D.216, L.217, I.271, Q.272, D.273, I.289, W.297, H.298
- Ligands: ZN.10
4 PLIP interactions:4 interactions with chain D- Hydrophobic interactions: D:I.271, D:D.273, D:I.289
- pi-Stacking: D:W.297
NVI.15: 13 residues within 4Å:- Chain E: D.127, E.169, E.170, D.216, L.217, I.271, Q.272, D.273, I.289, F.293, W.297, H.298
- Ligands: ZN.13
5 PLIP interactions:5 interactions with chain E- Hydrophobic interactions: E:I.271, E:D.273, E:I.289, E:F.293
- pi-Stacking: E:W.297
NVI.18: 13 residues within 4Å:- Chain F: D.127, E.169, E.170, W.175, D.216, L.217, I.271, Q.272, D.273, I.289, W.297, H.298
- Ligands: ZN.16
4 PLIP interactions:4 interactions with chain F- Hydrophobic interactions: F:I.271, F:D.273, F:I.289
- pi-Stacking: F:W.297
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Huang, K.F. et al., Crystal structures of human glutaminyl cyclase, an enzyme responsible for protein N-terminal pyroglutamate formation. Proc.Natl.Acad.Sci.Usa (2005)
- Release Date
- 2005-08-23
- Peptides
- Glutaminyl-peptide cyclotransferase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.68 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 6 x NVI: 1-VINYLIMIDAZOLE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Huang, K.F. et al., Crystal structures of human glutaminyl cyclase, an enzyme responsible for protein N-terminal pyroglutamate formation. Proc.Natl.Acad.Sci.Usa (2005)
- Release Date
- 2005-08-23
- Peptides
- Glutaminyl-peptide cyclotransferase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B