SMTL ID : 2ag9.1 (1 other biounit)

Crystal Structure of the Y137S mutant of GM2-Activator Protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

10 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.1: 2 residues within 4Å: Chain A: L.47 Ligands: IPA.7 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.47 IPA.2: 2 residues within 4Å: Chain A: L.55 Ligands: IPA.6 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.55 IPA.3: 1 residues within 4Å: Ligands: IPA.9 No protein-ligand interaction detected (PLIP) IPA.4: 3 residues within 4Å: Chain A: V.53, F.82 Ligands: IPA.7 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.53, A:F.82, A:F.82 IPA.5: 1 residues within 4Å: Chain A: G.75 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.75 IPA.6: 1 residues within 4Å: Ligands: IPA.2 No protein-ligand interaction detected (PLIP) IPA.7: 3 residues within 4Å: Chain A: V.39 Ligands: IPA.1, IPA.4 No protein-ligand interaction detected (PLIP) IPA.8: 3 residues within 4Å: Chain A: P.97, E.98 Ligands: IPA.10 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:P.97 Hydrogen bonds: A:E.98 IPA.9: 1 residues within 4Å: Ligands: IPA.3 No protein-ligand interaction detected (PLIP) IPA.10: 2 residues within 4Å: Chain A: P.97 Ligands: IPA.8 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:P.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wright, C.S. et al., Crystal Structure Analysis of Phosphatidylcholine-GM2-Activator Product Complexes: Evidence for Hydrolase Activity. Biochemistry (2005)

Release Date

2005-10-25

Peptides

Ganglioside GM2 activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ganglioside GM2 activator

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