SMTL ID : 2ag9.2 (1 other biounit)

Crystal Structure of the Y137S mutant of GM2-Activator Protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x MYR: MYRISTIC ACID(Non-covalent)

MYR.1: 7 residues within 4Å: Chain A: P.97, E.98, P.99, L.100, L.118, F.123 Ligands: IPA.5 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:P.97, A:L.100, A:L.118, A:F.123, A:F.123

4 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.2: 2 residues within 4Å: Chain A: K.112, E.113 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:K.112 IPA.3: 4 residues within 4Å: Chain A: A.17, G.41, S.42, L.47 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:A.17 IPA.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) IPA.5: 3 residues within 4Å: Chain A: L.100, P.106 Ligands: MYR.1 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wright, C.S. et al., Crystal Structure Analysis of Phosphatidylcholine-GM2-Activator Product Complexes: Evidence for Hydrolase Activity. Biochemistry (2005)

Release Date

2005-10-25

Peptides

Ganglioside GM2 activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ganglioside GM2 activator

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