SMTL ID : 2ai8.1 (2 other biounits)

E.coli Polypeptide Deformylase complexed with SB-485343

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 5 residues within 4Å: Chain A: Q.50, C.90, H.132, H.136 Ligands: SB7.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.90, A:H.132, A:H.136

1 x SB7: [HYDROXY(3-PHENYLPROPYL)AMINO]METHANOL(Non-covalent)

SB7.2: 13 residues within 4Å: Chain A: I.44, G.45, Q.50, I.86, E.88, G.89, C.90, L.91, R.97, H.132, E.133, H.136 Ligands: NI.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.44, A:I.44, A:I.86, A:E.88 Hydrogen bonds: A:Q.50, A:L.91 Salt bridges: A:E.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smith, K.J. et al., Structural Variation and inhibitor binding in polypeptide deformylase from four different bacterial species. Protein Sci. (2003)

Release Date

2005-09-06

Peptides

Peptide deformylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptide deformylase

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