SMTL ID : 2aq4.1

Ternary complex of the catalytic core of REV1 with DNA and dCTP.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: C.12 Chain C: D.58, D.163, E.164 Ligands: MG.2, DCP.3 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:D.58, C:D.163, C:E.164 MG.2: 6 residues within 4Å: Chain C: D.58, F.59, D.163, K.221 Ligands: MG.1, DCP.3 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:D.58, C:D.58, C:F.59, C:D.163

1 x DCP: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE(Non-covalent)

DCP.3: 18 residues within 4Å: Chain A: C.12 Chain C: R.20, L.24, D.58, F.59, D.60, C.61, F.62, F.63, A.97, S.98, Y.101, R.104, N.110, D.163, K.221 Ligands: MG.1, MG.2 17 PLIP interactions: 17 interactions with chain C Hydrophobic interactions: C:F.63 Hydrogen bonds: C:R.20, C:C.61, C:F.62, C:S.98, C:S.98, C:Y.101, C:Y.101, C:N.110 Water bridges: C:R.104, C:R.104, C:R.104, C:R.214, C:K.221 Salt bridges: C:R.104, C:R.104, C:K.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nair, D.T. et al., Rev1 employs a novel mechanism of DNA synthesis using a protein template. Science (2005)

Release Date

2005-10-04

Peptides

DNA repair protein REV1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

DNA repair protein REV1

Related Entries With Identical Sequence