SMTL ID : 3osp.1

Structure of rev1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x DCP: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE(Non-covalent)

DCP.1: 18 residues within 4Å: Chain A: R.20, L.24, D.58, F.59, D.60, C.61, F.62, F.63, A.97, S.98, Y.101, R.104, N.110, D.163, K.221 Chain C: C.12 Ligands: MG.2, MG.3 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:R.20, A:C.61, A:F.62, A:F.63, A:S.98, A:S.98, A:Y.101, A:Y.101, A:N.110 Water bridges: A:D.58, A:R.104, A:R.104, A:R.214 Salt bridges: A:R.104, A:R.104, A:K.221 pi-Stacking: A:F.63

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 6 residues within 4Å: Chain A: D.58, D.163, E.164 Chain C: C.12 Ligands: DCP.1, MG.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.58, A:D.163, A:E.164 MG.3: 6 residues within 4Å: Chain A: D.58, F.59, D.163, K.221 Ligands: DCP.1, MG.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.58, A:D.58, A:F.59, A:D.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nair, D.T. et al., DNA synthesis across an abasic lesion by yeast REV1 DNA polymerase. J.Mol.Biol. (2011)

Release Date

2011-04-13

Peptides

DNA repair protein REV1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA repair protein REV1

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