SMTL ID : 2bme.2 (3 other biounits)

high resolution structure of GppNHp-bound human Rab4a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

monomer

Ligands

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.1: 24 residues within 4Å: Chain A: N.18, A.19, G.20, T.21, G.22, K.23, S.24, C.25, F.35, K.36, D.37, S.39, H.41, T.42, A.67, G.68, N.123, K.124, D.126, L.127, S.153, A.154, L.155 Ligands: MG.2 29 PLIP interactions: 29 interactions with chain A Hydrogen bonds: A:G.20, A:T.21, A:T.21, A:G.22, A:K.23, A:K.23, A:S.24, A:C.25, A:K.36, A:S.39, A:N.40, A:H.41, A:T.42, A:G.68, A:N.123, A:K.124, A:K.124, A:A.154, A:L.155 Water bridges: A:S.24, A:S.24, A:T.42, A:D.65, A:Q.69, A:Q.69 Salt bridges: A:D.126 pi-Stacking: A:F.35, A:F.35 pi-Cation interactions: A:K.124

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: S.24, T.42 Ligands: GNP.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.24, A:T.42, H2O.2, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huber, S.K. et al., High Resolution Crystal Structures of Human Rab4A in its Active and Inactive Conformations. FEBS Lett. (2005)

Release Date

2005-04-25

Peptides

RAS-RELATED PROTEIN RAB4A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

RAS-RELATED PROTEIN RAB4A

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