SMTL ID : 2bok.1

Factor Xa - cation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 784: [AMINO (4-{(3AS,4R,8AS,8BR)-1,3-DIOXO-2- [3-(TRIMETHYLAMMONIO) PROPYL]DECAHYDROPYRROLO[3,4-A] PYRROLIZIN-4-YL}PHENYL) METHYLENE]AMMONIUM(Non-covalent)

784.1: 18 residues within 4Å: Chain A: H.42, Q.46, K.82, E.83, T.84, Y.85, F.162, D.179, A.180, Q.182, S.185, V.203, S.204, W.205, G.206, G.208, C.209, G.216 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.85, A:V.203 Hydrogen bonds: A:D.179, A:W.205, A:G.206 Water bridges: A:Y.85, A:Y.85, A:Q.182, A:E.207, A:I.217 pi-Cation interactions: A:Y.85, A:F.162

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: Y.173, D.174, R.211, K.214 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.213, A:K.214, A:K.214 Water bridges: A:R.211

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scharer, K. et al., Quantification of Cation-Pi Interactions in Protein-Ligand Complexes: Crystal-Structure Analysis of Factor Xa Bound to a Quaternary Ammonium Ion Ligand. Angew.Chem.Int.Ed.Engl. (2005)

Release Date

2005-06-16

Peptides

COAGULATION FACTOR X: A
COAGULATION FACTOR X: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
L

COAGULATION FACTOR X

COAGULATION FACTOR X

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