SMTL ID : 2bto.1

Structure of BtubA from Prosthecobacter dejongeii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-6-3-mer

Ligands

6 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.1: 21 residues within 4Å: Chain A: G.12, Q.13, A.14, Q.17, G.100, A.101, G.102, G.103, A.142, G.145, G.146, T.147, G.148, V.173, P.175, E.185, N.208, V.226, N.230, I.233 Chain C: R.73 23 PLIP interactions: 21 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:Q.13, A:A.14, A:A.101, A:G.102, A:G.103, A:G.145, A:G.146, A:T.147, A:T.147, A:G.148, A:E.185, A:N.208, A:N.208, A:N.230, A:N.230 Water bridges: A:G.15, A:G.144, A:G.144, A:S.149, A:S.149, A:E.185, C:R.73 Salt bridges: C:R.73 GTP.2: 21 residues within 4Å: Chain B: G.12, Q.13, A.14, Q.17, G.100, A.101, G.102, G.103, A.142, G.145, G.146, T.147, G.148, V.173, P.175, E.185, N.208, V.226, L.229, N.230, I.233 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:Q.13, B:A.14, B:A.101, B:G.102, B:G.103, B:G.145, B:G.146, B:T.147, B:T.147, B:G.148, B:E.185, B:N.208, B:N.208, B:N.230, B:N.230 Water bridges: B:A.142, B:G.144, B:S.149, B:E.185 GTP.3: 21 residues within 4Å: Chain D: G.12, Q.13, A.14, Q.17, G.100, A.101, G.102, G.103, A.142, G.145, G.146, T.147, G.148, V.173, P.175, E.185, N.208, V.226, N.230, I.233 Chain F: R.73 23 PLIP interactions: 21 interactions with chain D, 2 interactions with chain F Hydrogen bonds: D:Q.13, D:A.14, D:A.101, D:G.102, D:G.103, D:G.145, D:G.146, D:T.147, D:T.147, D:G.148, D:E.185, D:N.208, D:N.208, D:N.230, D:N.230 Water bridges: D:G.15, D:G.144, D:G.144, D:S.149, D:S.149, D:E.185, F:R.73 Salt bridges: F:R.73 GTP.4: 21 residues within 4Å: Chain E: G.12, Q.13, A.14, Q.17, G.100, A.101, G.102, G.103, A.142, G.145, G.146, T.147, G.148, V.173, P.175, E.185, N.208, V.226, L.229, N.230, I.233 19 PLIP interactions: 19 interactions with chain E Hydrogen bonds: E:Q.13, E:A.14, E:A.101, E:G.102, E:G.103, E:G.145, E:G.146, E:T.147, E:T.147, E:G.148, E:E.185, E:N.208, E:N.208, E:N.230, E:N.230 Water bridges: E:A.142, E:G.144, E:S.149, E:E.185 GTP.5: 21 residues within 4Å: Chain G: G.12, Q.13, A.14, Q.17, G.100, A.101, G.102, G.103, A.142, G.145, G.146, T.147, G.148, V.173, P.175, E.185, N.208, V.226, N.230, I.233 Chain I: R.73 23 PLIP interactions: 21 interactions with chain G, 2 interactions with chain I Hydrogen bonds: G:Q.13, G:A.14, G:A.101, G:G.102, G:G.103, G:G.145, G:G.146, G:T.147, G:T.147, G:G.148, G:E.185, G:N.208, G:N.208, G:N.230, G:N.230 Water bridges: G:G.15, G:G.144, G:G.144, G:S.149, G:S.149, G:E.185, I:R.73 Salt bridges: I:R.73 GTP.6: 21 residues within 4Å: Chain H: G.12, Q.13, A.14, Q.17, G.100, A.101, G.102, G.103, A.142, G.145, G.146, T.147, G.148, V.173, P.175, E.185, N.208, V.226, L.229, N.230, I.233 19 PLIP interactions: 19 interactions with chain H Hydrogen bonds: H:Q.13, H:A.14, H:A.101, H:G.102, H:G.103, H:G.145, H:G.146, H:T.147, H:T.147, H:G.148, H:E.185, H:N.208, H:N.208, H:N.230, H:N.230 Water bridges: H:A.142, H:G.144, H:S.149, H:E.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schlieper, D. et al., Structure of Bacterial Tubulin Btuba/B: Evidence for Horizontal Gene Transfer. Proc.Natl.Acad.Sci.USA (2005)

Release Date

2005-06-23

Peptides

TUBULIN BTUBA: ABDEGH
THIOREDOXIN 1: CFI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D
A

E
B

G
A

H
B

C
T

F
T

I
T

TUBULIN BTUBA

THIOREDOXIN 1

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