SMTL ID : 2btq.1

Structure of BtubAB heterodimer from Prosthecobacter dejongeii

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 19 residues within 4Å: Chain A: G.12, Q.13, A.14, Q.17, A.142, G.144, G.145, G.146, T.147, G.148, V.173, P.175, V.179, S.180, S.181, N.208, V.226, N.230, I.233 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:Q.13, A:A.14, A:G.146, A:T.147, A:G.148, A:S.176, A:V.179, A:S.181, A:N.208, A:N.230, A:N.230, A:N.230 GDP.6: 19 residues within 4Å: Chain C: G.12, Q.13, A.14, Q.17, A.142, G.144, G.145, G.146, T.147, G.148, V.173, P.175, V.179, S.180, S.181, N.208, V.226, N.230, I.233 13 PLIP interactions: 13 interactions with chain C Hydrogen bonds: C:Q.13, C:A.14, C:G.146, C:T.147, C:T.147, C:G.148, C:S.176, C:V.179, C:S.181, C:N.208, C:N.230, C:N.230, C:N.230

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain B: G.10, Q.11, G.142, G.143, S.144, G.145 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Q.11, B:C.12, B:G.143, B:S.144, B:G.145 SO4.3: 8 residues within 4Å: Chain A: N.4, E.253, S.255 Chain B: K.94, P.96, G.97, A.98, A.99 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:N.4, A:S.255, B:G.97, B:A.99 Salt bridges: B:K.94 SO4.4: 1 residues within 4Å: Chain B: R.405 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.405 SO4.5: 1 residues within 4Å: Chain B: R.412 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.412 SO4.7: 6 residues within 4Å: Chain D: G.10, Q.11, G.142, G.143, S.144, G.145 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:Q.11, D:C.12, D:G.143, D:S.144, D:G.145 SO4.8: 8 residues within 4Å: Chain C: N.4, E.253, S.255 Chain D: K.94, P.96, G.97, A.98, A.99 5 PLIP interactions: 3 interactions with chain D, 2 interactions with chain C Hydrogen bonds: D:G.97, D:A.99, C:N.4, C:S.255 Salt bridges: D:K.94 SO4.9: 1 residues within 4Å: Chain D: R.405 1 PLIP interactions: 1 interactions with chain D Salt bridges: D:R.405 SO4.10: 1 residues within 4Å: Chain D: R.412 1 PLIP interactions: 1 interactions with chain D Salt bridges: D:R.412

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schlieper, D. et al., Structure of Bacterial Tubulin Btuba/B: Evidence for Horizontal Gene Transfer. Proc.Natl.Acad.Sci.USA (2005)

Release Date

2005-06-14

Peptides

TUBULIN BTUBA: AC
TUBULIN BTUBB: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

TUBULIN BTUBA

TUBULIN BTUBB

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