- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- hetero-12-12-mer
- Ligands
- 12 x FE: FE (III) ION(Non-covalent)
- 12 x PHB: P-HYDROXYBENZOIC ACID(Non-covalent)
PHB.2: 11 residues within 4Å:- Chain A: G.18, P.19, R.142
- Chain B: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.1
4 PLIP interactions:1 interactions with chain A, 3 interactions with chain B- Hydrophobic interactions: A:P.19, B:Y.148, B:I.192
- Water bridges: B:S.158
PHB.4: 11 residues within 4Å:- Chain C: G.18, P.19, R.142
- Chain D: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.3
5 PLIP interactions:4 interactions with chain D, 1 interactions with chain C- Hydrophobic interactions: D:Y.148, D:I.192, C:P.19
- Water bridges: D:T.27, D:S.158
PHB.6: 11 residues within 4Å:- Chain E: G.18, P.19, R.142
- Chain F: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.5
6 PLIP interactions:5 interactions with chain F, 1 interactions with chain E- Hydrophobic interactions: F:Y.148, F:I.192, E:P.19
- Hydrogen bonds: F:Y.25
- Water bridges: F:T.27, F:S.158
PHB.8: 11 residues within 4Å:- Chain G: G.18, P.19, R.142
- Chain H: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.7
4 PLIP interactions:3 interactions with chain H, 1 interactions with chain G- Hydrophobic interactions: H:Y.148, H:I.192, G:P.19
- Water bridges: H:S.158
PHB.10: 11 residues within 4Å:- Chain I: G.18, P.19, R.142
- Chain J: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.9
6 PLIP interactions:1 interactions with chain I, 5 interactions with chain J- Hydrophobic interactions: I:P.19, J:Y.148, J:I.192
- Hydrogen bonds: J:Y.25
- Water bridges: J:T.27, J:S.158
PHB.12: 11 residues within 4Å:- Chain K: G.18, P.19, R.142
- Chain L: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.11
5 PLIP interactions:1 interactions with chain K, 4 interactions with chain L- Hydrophobic interactions: K:P.19, L:Y.148, L:I.192
- Hydrogen bonds: L:Y.25
- Water bridges: L:S.158
PHB.14: 11 residues within 4Å:- Chain M: G.18, P.19, R.142
- Chain N: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.13
5 PLIP interactions:4 interactions with chain N, 1 interactions with chain M- Hydrophobic interactions: N:Y.148, N:I.192, M:P.19
- Water bridges: N:T.27, N:S.158
PHB.16: 11 residues within 4Å:- Chain O: G.18, P.19, R.142
- Chain P: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.15
5 PLIP interactions:4 interactions with chain P, 1 interactions with chain O- Hydrophobic interactions: P:Y.148, P:I.192, O:P.19
- Hydrogen bonds: P:H.163
- Water bridges: P:S.158
PHB.18: 11 residues within 4Å:- Chain Q: G.18, P.19, R.142
- Chain R: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.17
4 PLIP interactions:3 interactions with chain R, 1 interactions with chain Q- Hydrophobic interactions: R:Y.148, R:I.192, Q:P.19
- Water bridges: R:S.158
PHB.20: 11 residues within 4Å:- Chain S: G.18, P.19, R.142
- Chain T: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.19
6 PLIP interactions:5 interactions with chain T, 1 interactions with chain S- Hydrophobic interactions: T:Y.148, T:I.192, S:P.19
- Hydrogen bonds: T:Y.25
- Water bridges: T:T.27, T:S.158
PHB.22: 11 residues within 4Å:- Chain U: G.18, P.19, R.142
- Chain V: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.21
5 PLIP interactions:4 interactions with chain V, 1 interactions with chain U- Hydrophobic interactions: V:Y.148, V:I.192, U:P.19
- Hydrogen bonds: V:Y.25
- Water bridges: V:S.158
PHB.24: 11 residues within 4Å:- Chain W: G.18, P.19, R.142
- Chain X: Y.25, Y.109, Y.148, W.150, H.161, H.163, I.192
- Ligands: FE.23
6 PLIP interactions:5 interactions with chain X, 1 interactions with chain W- Hydrophobic interactions: X:Y.148, X:I.192, W:P.19
- Hydrogen bonds: X:Y.25
- Water bridges: X:T.27, X:S.158
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vetting, M.W., Crystallographic Studies of Intradiol Dioxygenases. Phd Thesis (2001)
- Release Date
- 2006-10-26
- Peptides
- PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN: ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AG
AI
AK
AM
AO
AQ
AS
AU
AW
AB
BD
BF
BH
BJ
BL
BN
BP
BR
BT
BV
BX
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- hetero-12-12-mer
- Ligands
- 12 x FE: FE (III) ION(Non-covalent)
- 12 x PHB: P-HYDROXYBENZOIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vetting, M.W., Crystallographic Studies of Intradiol Dioxygenases. Phd Thesis (2001)
- Release Date
- 2006-10-26
- Peptides
- PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN: ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AG
AI
AK
AM
AO
AQ
AS
AU
AW
AB
BD
BF
BH
BJ
BL
BN
BP
BR
BT
BV
BX
B