SMTL ID : 2c3a.1 (1 other biounit)

Structure of unliganded HSV gD reveals a mechanism for receptor- mediated activation of virus entry

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: Q.20, P.71, N.73, N.150 No protein-ligand interaction detected (PLIP)

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: Q.6, F.202, I.203, N.206, P.276 Ligand excluded by PLIP

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 2 residues within 4Å: Chain A: E.125, E.205 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.125, A:E.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Krummenacher, C. et al., Structure of Unliganded Hsv Gd Reveals a Mechanism for Receptor-Mediated Activation of Virus Entry. Embo J. (2005)

Release Date

2005-12-21

Peptides

GLYCOPROTEIN D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GLYCOPROTEIN D

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