SMTL ID : 2cag.1

CATALASE COMPOUND II

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-tetramer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Covalent)

HEM.1: 25 residues within 4Å: Chain A: R.51, M.53, H.54, R.91, G.110, F.111, V.125, G.126, N.127, F.132, P.137, F.140, G.195, S.196, H.197, F.313, M.329, R.333, S.336, Y.337, A.340, H.341, R.344 Chain D: L.40, D.44 23 PLIP interactions: 1 interactions with chain D, 22 interactions with chain A, Hydrophobic interactions: D:L.40, A:H.54, A:V.125, A:F.132, A:P.137, A:F.140, A:F.140, A:F.140, A:F.140, A:R.333, A:Y.337, A:Y.337, A:A.340 Water bridges: A:R.52 Salt bridges: A:R.51, A:R.51, A:R.91, A:H.341, A:R.344 pi-Stacking: A:H.54, A:F.140 pi-Cation interactions: A:R.333 Metal complexes: A:Y.337 HEM.2: 25 residues within 4Å: Chain B: R.51, M.53, H.54, R.91, G.110, F.111, V.125, G.126, N.127, F.132, P.137, F.140, G.195, S.196, H.197, F.313, M.329, R.333, S.336, Y.337, A.340, H.341, R.344 Chain C: L.40, D.44 23 PLIP interactions: 22 interactions with chain B, 1 interactions with chain C, Hydrophobic interactions: B:H.54, B:V.125, B:F.132, B:P.137, B:F.140, B:F.140, B:F.140, B:F.140, B:R.333, B:Y.337, B:Y.337, B:A.340, C:L.40 Water bridges: B:R.52 Salt bridges: B:R.51, B:R.51, B:R.91, B:H.341, B:R.344 pi-Stacking: B:H.54, B:F.140 pi-Cation interactions: B:R.333 Metal complexes: B:Y.337 HEM.3: 25 residues within 4Å: Chain B: L.40, D.44 Chain C: R.51, M.53, H.54, R.91, G.110, F.111, V.125, G.126, N.127, F.132, P.137, F.140, G.195, S.196, H.197, F.313, M.329, R.333, S.336, Y.337, A.340, H.341, R.344 23 PLIP interactions: 22 interactions with chain C, 1 interactions with chain B, Hydrophobic interactions: C:H.54, C:V.125, C:F.132, C:P.137, C:F.140, C:F.140, C:F.140, C:F.140, C:R.333, C:Y.337, C:Y.337, C:A.340, B:L.40 Water bridges: C:R.52 Salt bridges: C:R.51, C:R.51, C:R.91, C:H.341, C:R.344 pi-Stacking: C:H.54, C:F.140 pi-Cation interactions: C:R.333 Metal complexes: C:Y.337 HEM.4: 25 residues within 4Å: Chain A: L.40, D.44 Chain D: R.51, M.53, H.54, R.91, G.110, F.111, V.125, G.126, N.127, F.132, P.137, F.140, G.195, S.196, H.197, F.313, M.329, R.333, S.336, Y.337, A.340, H.341, R.344 23 PLIP interactions: 22 interactions with chain D, 1 interactions with chain A, Hydrophobic interactions: D:H.54, D:V.125, D:F.132, D:P.137, D:F.140, D:F.140, D:F.140, D:F.140, D:R.333, D:Y.337, D:Y.337, D:A.340, A:L.40 Water bridges: D:R.52 Salt bridges: D:R.51, D:R.51, D:R.91, D:H.341, D:R.344 pi-Stacking: D:H.54, D:F.140 pi-Cation interactions: D:R.333 Metal complexes: D:Y.337

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gouet, P. et al., Ferryl intermediates of catalase captured by time-resolved Weissenberg crystallography and UV-VIS spectroscopy. Nat.Struct.Biol. (1996)

Release Date

1996-12-07

Peptides

CATALASE COMPOUND II: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

CATALASE COMPOUND II

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