SMTL ID : 2cer.1 (1 other biounit)

Beta-glycosidase from Sulfolobus solfataricus in complex with phenethyl-substituted glucoimidazole

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

monomer

Ligands

1 x PGI: (5R,6R,7S,8S)-5-(HYDROXYMETHYL)-2-(2-PHENYLETHYL)-1,5,6,7,8,8A-HEXAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL(Non-covalent)

PGI.1: 14 residues within 4Å: Chain A: Q.18, H.150, W.151, N.205, E.206, A.263, N.264, Y.322, W.361, E.387, W.425, E.432, W.433, F.441 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:A.263, A:Y.322 Hydrogen bonds: A:Q.18, A:Q.18, A:H.150, A:N.205, A:E.206, A:N.320, A:E.432 Water bridges: A:N.430

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 2 residues within 4Å: Chain A: E.464, E.474 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.474, A:E.474 ACT.3: 5 residues within 4Å: Chain A: Y.2, Y.407, H.410, R.411, N.414 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:R.411 Hydrogen bonds: A:Y.407, A:Y.407 Water bridges: A:Y.2 Salt bridges: A:H.410

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gloster, T.M. et al., Structural, Kinetic, and Thermodynamic Analysis of Glucoimidazole-Derived Glycosidase Inhibitors. Biochemistry (2006)

Release Date

2006-09-27

Peptides

BETA-GLUCOSIDASE A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BETA-GLUCOSIDASE A

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