SMTL ID : 2cvz.1

Structure of hydroxyisobutyrate dehydrogenase from thermus thermophilus HB8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

3 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 23 residues within 4Å: Chain B: G.8, L.9, G.10, A.11, M.12, N.30, R.31, T.32, C.62, L.63, P.64, E.68, E.71, T.90, S.91, V.116, G.119, K.165, T.226, F.227, L.231, K.234, D.235 25 PLIP interactions: 25 interactions with chain B Hydrophobic interactions: B:F.227 Hydrogen bonds: B:L.9, B:A.11, B:N.30, B:N.30, B:R.31, B:T.32, B:T.32, B:L.63, B:E.71, B:S.91, B:S.91, B:T.120, B:T.226, B:K.234 Water bridges: B:G.10, B:G.13, B:R.31, B:E.68, B:E.68, B:E.68, B:E.68, B:A.228 Salt bridges: B:R.31 pi-Cation interactions: B:R.31 NDP.2: 23 residues within 4Å: Chain A: G.8, L.9, G.10, A.11, M.12, N.30, R.31, T.32, C.62, L.63, P.64, E.68, E.71, T.90, S.91, V.116, G.119, K.165, T.226, F.227, L.231, K.234, D.235 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:F.227 Hydrogen bonds: A:L.9, A:A.11, A:N.30, A:N.30, A:R.31, A:T.32, A:T.32, A:L.63, A:E.71, A:S.91, A:S.91, A:T.120, A:T.226, A:K.234 Water bridges: A:G.8, A:G.10, A:G.13, A:R.31, A:E.68, A:E.68, A:A.228 Salt bridges: A:R.31 pi-Cation interactions: A:R.31 NDP.3: 23 residues within 4Å: Chain C: G.8, L.9, G.10, A.11, M.12, N.30, R.31, T.32, C.62, L.63, P.64, E.68, E.71, T.90, S.91, V.116, G.119, K.165, T.226, F.227, L.231, K.234, D.235 22 PLIP interactions: 22 interactions with chain C Hydrophobic interactions: C:F.227 Hydrogen bonds: C:L.9, C:A.11, C:N.30, C:N.30, C:R.31, C:T.32, C:T.32, C:L.63, C:E.71, C:S.91, C:S.91, C:T.226, C:K.234 Water bridges: C:G.10, C:G.13, C:R.31, C:T.120, C:T.226, C:A.228 Salt bridges: C:R.31 pi-Cation interactions: C:R.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lokanath, N.K. et al., Crystal Structure of Novel NADP-dependent 3-Hydroxyisobutyrate Dehydrogenase from Thermus thermophilus HB8. J.Mol.Biol. (2005)

Release Date

2005-06-28

Peptides

3-hydroxyisobutyrate dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

3-hydroxyisobutyrate dehydrogenase

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