SMTL ID : 2cws.1

Crystal structure at 1.0 A of alginate lyase A1-II', a member of polysaccharide lyase family-7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.00 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.63, R.67, Q.110, H.112, Y.205 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.110, A:Y.205 Water bridges: A:R.67, A:R.67 Salt bridges: A:R.67, A:H.112 SO4.2: 5 residues within 4Å: Chain A: K.16, Q.18, R.71, S.79, I.114 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:Q.18, A:S.79 Water bridges: A:K.16, A:E.26, A:R.71, A:S.79, A:Y.199 Salt bridges: A:K.16, A:R.71

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: N.82, W.83, G.84, H.89, K.197 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.82, A:G.84, A:K.197 Water bridges: A:W.85, A:H.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamasaki, M. et al., A Structural Basis for Depolymerization of Alginate by Polysaccharide Lyase Family-7. J.Mol.Biol. (2005)

Release Date

2005-11-15

Peptides

alginate lyase A1-II': A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

alginate lyase A1-II'

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