SMTL ID : 2cxn.1

Crystal structure of mouse AMF / phosphate complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-dimer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: S.160, S.210, K.211, T.212, T.215 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.160, A:S.210, A:S.210, A:K.211, A:T.212, A:T.215 Water bridges: A:I.157, A:G.159

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: R.135, D.140, W.141, K.142, K.241 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.140, A:K.142, A:K.142, A:K.241 GOL.3: 6 residues within 4Å: Chain A: G.419, H.422, K.423, L.426 Chain B: I.549, R.553 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:G.419, A:K.423, B:R.553 GOL.4: 6 residues within 4Å: Chain A: I.549, R.553 Chain B: G.419, H.422, K.423, L.426 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:R.553, B:G.419, B:K.423 GOL.5: 4 residues within 4Å: Chain B: R.135, W.141, K.142, K.241 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.135, B:K.142, B:K.142 Water bridges: B:D.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tanaka, N. et al., Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors. J.Mol.Biol. (2006)

Release Date

2006-05-23

Peptides

Glucose-6-phosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucose-6-phosphate isomerase

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