SMTL ID : 2dec.1

Crystal Structure of the PH0510 protein from Pyrococcus horikoshii OT3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: S.87, R.88, T.92 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.88, A:T.92 Water bridges: A:R.88

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: H.43, F.44, P.64 Chain B: P.221, E.224, F.229 No protein-ligand interaction detected (PLIP) EDO.3: 4 residues within 4Å: Chain B: E.113, T.117, S.123, V.125 3 PLIP interactions: 3 interactions with chain B Water bridges: B:T.117, B:S.123, B:S.123 EDO.4: 7 residues within 4Å: Chain A: C.39, G.40, S.41, M.135, L.207, E.211 Chain B: H.227 5 PLIP interactions: 1 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:H.227, A:S.41 Water bridges: A:S.41, A:S.41, A:R.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mizutani, H. et al., Crystal Structure of the PH0510 protein from Pyrococcus horikoshii OT3. To be Published

Release Date

2006-08-10

Peptides

325aa long hypothetical protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

325aa long hypothetical protein

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