SMTL ID : 2dup.2 (1 other biounit)

Crystal structure of VIP36 exoplasmic/lumenal domain, metal-free form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: R.8, S.11, I.13, Y.16, G.18 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: R.161, D.162, H.163 Ligand excluded by PLIP

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: D.83, Y.116, N.118, G.212, D.213, L.214 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.118, A:N.118, A:G.212, A:D.213, A:L.214, A:L.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Satoh, T. et al., Structural basis for recognition of high mannose type glycoproteins by mammalian transport lectin VIP36. J.Biol.Chem. (2007)

Release Date

2007-07-24

Peptides

Vesicular integral-membrane protein VIP36: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Vesicular integral-membrane protein VIP36

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