SMTL ID : 2e9s.2 (2 other biounits)

human neuronal Rab6B in three intermediate forms

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: T.16 Ligands: GDP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.16, H2O.1, H2O.1, H2O.3, H2O.3

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 18 residues within 4Å: Chain A: E.10, Q.11, S.12, V.13, G.14, K.15, T.16, S.17, F.27, D.28, N.115, K.116, D.118, L.119, S.145, A.146, K.147 Ligands: MG.1 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:S.12, A:V.13, A:G.14, A:K.15, A:T.16, A:S.17, A:S.17, A:D.28, A:N.115, A:K.116, A:K.116, A:A.146, A:K.147 Water bridges: A:K.15, A:T.16, A:T.16 Salt bridges: A:K.15, A:D.118 pi-Stacking: A:F.27, A:F.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vellieux, F.M. et al., 3D structure of human neuronal Rab6B in three intermediate forms. To be Published

Release Date

2008-01-29

Peptides

Ras-related protein Rab-6B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ras-related protein Rab-6B

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