- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.97 Å
- Oligo State
- homo-dimer
- Ligands
- 12 x ZN: ZINC ION(Non-covalent)
- 2 x BES: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID(Non-covalent)
BES.7: 13 residues within 4Å:- Chain A: H.228, D.240, E.272, E.273, D.301, M.302, R.345, I.362, V.366, Y.370, H.371
- Ligands: ZN.1, ZN.2
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:I.362, A:V.366, A:Y.370
- Hydrogen bonds: A:D.240, A:Y.370
- Water bridges: A:R.345
- Salt bridges: A:R.345, A:H.371
- pi-Cation interactions: A:R.345
BES.15: 13 residues within 4Å:- Chain B: H.228, D.240, E.272, E.273, D.301, M.302, R.345, I.362, V.366, Y.370, H.371
- Ligands: ZN.9, ZN.10
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:I.362, B:V.366, B:Y.370
- Hydrogen bonds: B:D.240, B:Y.370
- Water bridges: B:R.345
- Salt bridges: B:R.345, B:H.371
- pi-Cation interactions: B:R.345
- 2 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
IPA.8: 8 residues within 4Å:- Chain A: D.261, Q.398, A.399, A.400, R.401, G.403, E.404, L.405
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.401
IPA.16: 8 residues within 4Å:- Chain B: D.261, Q.398, A.399, A.400, R.401, G.403, E.404, L.405
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:R.401
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Akioka, M. et al., Structural characterization of a novel bacterial aminopeptidase with an apical domain from aneurinibacillus sp. strain AM-1. To be published
- Release Date
- 2008-03-25
- Peptides
- Aminopeptidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.97 Å
- Oligo State
- homo-dimer
- Ligands
- 12 x ZN: ZINC ION(Non-covalent)
- 2 x BES: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID(Non-covalent)
- 2 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Akioka, M. et al., Structural characterization of a novel bacterial aminopeptidase with an apical domain from aneurinibacillus sp. strain AM-1. To be published
- Release Date
- 2008-03-25
- Peptides
- Aminopeptidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A