SMTL ID : 2epj.1

Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x PMP: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE(Non-covalent)

PMP.1: 15 residues within 4Å: Chain A: S.120, G.121, T.122, Y.148, H.149, G.150, E.210, N.215, D.243, V.245, V.246, K.271 Chain B: G.302, T.303, F.304 18 PLIP interactions: 13 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:E.210, A:V.245, A:V.245 Hydrogen bonds: A:G.121, A:T.122, A:T.122, A:T.122, A:N.215, A:N.215, A:K.271, B:T.303, B:T.303, B:T.303 Water bridges: A:S.120, A:Y.148, B:N.119, B:F.304 pi-Stacking: A:Y.148 PMP.2: 15 residues within 4Å: Chain A: G.302, T.303, F.304 Chain B: S.120, G.121, T.122, Y.148, H.149, G.150, E.210, N.215, D.243, V.245, V.246, K.271 16 PLIP interactions: 11 interactions with chain B, 5 interactions with chain A Hydrophobic interactions: B:E.210, B:V.245, B:V.245 Hydrogen bonds: B:G.121, B:T.122, B:T.122, B:N.215, B:N.215, B:K.271, A:T.303, A:T.303, A:T.303 Water bridges: B:T.122, A:N.119, A:F.304 pi-Stacking: B:Y.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mizutani, H. et al., Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix. To be Published

Release Date

2007-10-02

Peptides

Glutamate-1-semialdehyde 2,1-aminomutase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glutamate-1-semialdehyde 2,1-aminomutase

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