SMTL ID : 2ffv.2 (2 other biounits)

Human ppGalNAcT-2 complexed with manganese and UDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: D.154, H.156, H.289 Ligands: UDP.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.154, A:H.156, A:H.289

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.2: 15 residues within 4Å: Chain A: T.73, F.74, H.75, D.106, R.131, G.133, L.134, S.137, D.154, H.156, V.260, H.289, R.292, H.295 Ligands: MN.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:T.73, A:L.134 Hydrogen bonds: A:D.106, A:R.131, A:S.137 Salt bridges: A:H.156, A:H.156, A:H.289, A:R.292, A:H.295

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fritz, T.A. et al., Dynamic Association between the Catalytic and Lectin Domains of Human UDP-GalNAc:Polypeptide {alpha}-N-Acetylgalactosaminyltransferase-2. J.Biol.Chem. (2006)

Release Date

2006-01-31

Peptides

Polypeptide N-acetylgalactosaminyltransferase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Polypeptide N-acetylgalactosaminyltransferase 2

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