SMTL ID : 2fkz.1

Reduced (All Ferrous) form of the Azotobacter vinelandii bacterioferritin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-24-mer

Ligands

54 x FE2: FE (II) ION(Non-covalent)

FE2.1: 5 residues within 4Å: Chain A: E.18, E.51, H.54, E.127 Ligands: FE2.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.18, A:E.51, A:H.54, A:E.127 FE2.2: 5 residues within 4Å: Chain A: E.51, E.94, E.127, H.130 Ligands: FE2.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.51, A:E.94, A:E.94, A:E.127, H2O.3 FE2.5: 5 residues within 4Å: Chain B: E.18, E.51, H.54, E.127 Ligands: FE2.6 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.18, B:E.18, B:E.51, B:H.54, B:E.127 FE2.6: 5 residues within 4Å: Chain B: E.51, E.94, E.127, H.130 Ligands: FE2.5 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.51, B:E.94, B:E.94, B:E.127, H2O.6 FE2.7: 8 residues within 4Å: Chain B: N.148, Q.151 Chain D: N.148, Q.151 Chain K: N.148, Q.151 Chain M: N.148, Q.151 No protein-ligand interaction detected (PLIP) FE2.10: 4 residues within 4Å: Chain C: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:E.18, C:E.18, C:E.51, C:H.54, C:E.127 FE2.11: 4 residues within 4Å: Chain C: E.51, E.94, E.127, H.130 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.51, C:E.94, C:E.127, H2O.8, H2O.10 FE2.14: 4 residues within 4Å: Chain D: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:E.18, D:E.18, D:E.51, D:H.54, D:E.127 FE2.15: 4 residues within 4Å: Chain D: E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:E.51, D:E.94, D:E.94, D:E.127 FE2.19: 4 residues within 4Å: Chain E: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain E Metal complexes: E:E.18, E:E.18, E:E.51, E:H.54, E:E.127 FE2.20: 4 residues within 4Å: Chain E: E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:E.51, E:E.94, E:E.94, E:E.127 FE2.23: 5 residues within 4Å: Chain F: E.18, E.51, H.54, E.127 Ligands: FE2.24 5 PLIP interactions: 5 interactions with chain F Metal complexes: F:E.18, F:E.18, F:E.51, F:H.54, F:E.127 FE2.24: 5 residues within 4Å: Chain F: E.51, E.94, E.127, H.130 Ligands: FE2.23 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:E.51, F:E.94, F:E.94, F:E.127 FE2.26: 4 residues within 4Å: Chain G: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain G Metal complexes: G:E.18, G:E.18, G:E.51, G:H.54, G:E.127 FE2.27: 4 residues within 4Å: Chain G: E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:E.51, G:E.94, G:E.94, G:E.127 FE2.28: 8 residues within 4Å: Chain H: N.148, Q.151 Chain Q: N.148, Q.151 Chain V: N.148, Q.151 Chain W: N.148, Q.151 No protein-ligand interaction detected (PLIP) FE2.32: 5 residues within 4Å: Chain H: E.18, E.51, H.54, I.123, E.127 5 PLIP interactions: 5 interactions with chain H Metal complexes: H:E.18, H:E.18, H:E.51, H:H.54, H:E.127 FE2.33: 4 residues within 4Å: Chain H: E.51, E.94, E.127, H.130 5 PLIP interactions: 3 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:E.51, H:E.94, H:E.127, H2O.32, H2O.32 FE2.36: 5 residues within 4Å: Chain I: E.18, E.51, H.54, E.127 Ligands: FE2.37 4 PLIP interactions: 4 interactions with chain I Metal complexes: I:E.18, I:E.51, I:H.54, I:E.127 FE2.37: 5 residues within 4Å: Chain I: E.51, E.94, E.127, H.130 Ligands: FE2.36 5 PLIP interactions: 4 interactions with chain I, 1 Ligand-Water interactions Metal complexes: I:E.51, I:E.94, I:E.94, I:E.127, H2O.35 FE2.40: 5 residues within 4Å: Chain J: E.18, E.51, H.54, E.127 Ligands: FE2.41 5 PLIP interactions: 5 interactions with chain J Metal complexes: J:E.18, J:E.18, J:E.51, J:H.54, J:E.127 FE2.41: 5 residues within 4Å: Chain J: E.51, E.94, E.127, H.130 Ligands: FE2.40 5 PLIP interactions: 4 interactions with chain J, 1 Ligand-Water interactions Metal complexes: J:E.51, J:E.94, J:E.94, J:E.127, H2O.38 FE2.42: 8 residues within 4Å: Chain J: N.148, Q.151 Chain L: N.148, Q.151 Chain S: N.148, Q.151 Chain U: N.148, Q.151 No protein-ligand interaction detected (PLIP) FE2.45: 4 residues within 4Å: Chain K: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain K Metal complexes: K:E.18, K:E.18, K:E.51, K:H.54, K:E.127 FE2.46: 4 residues within 4Å: Chain K: E.51, E.94, E.127, H.130 5 PLIP interactions: 3 interactions with chain K, 2 Ligand-Water interactions Metal complexes: K:E.51, K:E.94, K:E.127, H2O.39, H2O.42 FE2.49: 4 residues within 4Å: Chain L: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain L Metal complexes: L:E.18, L:E.18, L:E.51, L:H.54, L:E.127 FE2.50: 4 residues within 4Å: Chain L: E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain L Metal complexes: L:E.51, L:E.94, L:E.94, L:E.127 FE2.54: 4 residues within 4Å: Chain M: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain M Metal complexes: M:E.18, M:E.18, M:E.51, M:H.54, M:E.127 FE2.55: 4 residues within 4Å: Chain M: E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain M Metal complexes: M:E.51, M:E.94, M:E.94, M:E.127 FE2.58: 5 residues within 4Å: Chain N: E.18, E.51, H.54, E.127 Ligands: FE2.59 5 PLIP interactions: 5 interactions with chain N Metal complexes: N:E.18, N:E.18, N:E.51, N:H.54, N:E.127 FE2.59: 5 residues within 4Å: Chain N: E.51, E.94, E.127, H.130 Ligands: FE2.58 4 PLIP interactions: 4 interactions with chain N Metal complexes: N:E.51, N:E.94, N:E.94, N:E.127 FE2.61: 4 residues within 4Å: Chain O: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain O Metal complexes: O:E.18, O:E.18, O:E.51, O:H.54, O:E.127 FE2.62: 4 residues within 4Å: Chain O: E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain O Metal complexes: O:E.51, O:E.94, O:E.94, O:E.127 FE2.63: 8 residues within 4Å: Chain A: N.148, Q.151 Chain F: N.148, Q.151 Chain G: N.148, Q.151 Chain P: N.148, Q.151 No protein-ligand interaction detected (PLIP) FE2.67: 5 residues within 4Å: Chain P: E.18, E.51, H.54, I.123, E.127 5 PLIP interactions: 5 interactions with chain P Metal complexes: P:E.18, P:E.18, P:E.51, P:H.54, P:E.127 FE2.68: 4 residues within 4Å: Chain P: E.51, E.94, E.127, H.130 5 PLIP interactions: 3 interactions with chain P, 2 Ligand-Water interactions Metal complexes: P:E.51, P:E.94, P:E.127, H2O.64, H2O.64 FE2.71: 5 residues within 4Å: Chain Q: E.18, E.51, H.54, E.127 Ligands: FE2.72 4 PLIP interactions: 4 interactions with chain Q Metal complexes: Q:E.18, Q:E.51, Q:H.54, Q:E.127 FE2.72: 5 residues within 4Å: Chain Q: E.51, E.94, E.127, H.130 Ligands: FE2.71 5 PLIP interactions: 4 interactions with chain Q, 1 Ligand-Water interactions Metal complexes: Q:E.51, Q:E.94, Q:E.94, Q:E.127, H2O.67 FE2.75: 5 residues within 4Å: Chain R: E.18, E.51, H.54, E.127 Ligands: FE2.76 5 PLIP interactions: 5 interactions with chain R Metal complexes: R:E.18, R:E.18, R:E.51, R:H.54, R:E.127 FE2.76: 5 residues within 4Å: Chain R: E.51, E.94, E.127, H.130 Ligands: FE2.75 5 PLIP interactions: 4 interactions with chain R, 1 Ligand-Water interactions Metal complexes: R:E.51, R:E.94, R:E.94, R:E.127, H2O.70 FE2.77: 8 residues within 4Å: Chain C: N.148, Q.151 Chain E: N.148, Q.151 Chain R: N.148, Q.151 Chain T: N.148, Q.151 No protein-ligand interaction detected (PLIP) FE2.80: 4 residues within 4Å: Chain S: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain S Metal complexes: S:E.18, S:E.18, S:E.51, S:H.54, S:E.127 FE2.81: 4 residues within 4Å: Chain S: E.51, E.94, E.127, H.130 5 PLIP interactions: 3 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:E.51, S:E.94, S:E.127, H2O.71, H2O.74 FE2.84: 4 residues within 4Å: Chain T: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain T Metal complexes: T:E.18, T:E.18, T:E.51, T:H.54, T:E.127 FE2.85: 4 residues within 4Å: Chain T: E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain T Metal complexes: T:E.51, T:E.94, T:E.94, T:E.127 FE2.89: 4 residues within 4Å: Chain U: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain U Metal complexes: U:E.18, U:E.18, U:E.51, U:H.54, U:E.127 FE2.90: 4 residues within 4Å: Chain U: E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain U Metal complexes: U:E.51, U:E.94, U:E.94, U:E.127 FE2.93: 5 residues within 4Å: Chain V: E.18, E.51, H.54, E.127 Ligands: FE2.94 5 PLIP interactions: 5 interactions with chain V Metal complexes: V:E.18, V:E.18, V:E.51, V:H.54, V:E.127 FE2.94: 5 residues within 4Å: Chain V: E.51, E.94, E.127, H.130 Ligands: FE2.93 4 PLIP interactions: 4 interactions with chain V Metal complexes: V:E.51, V:E.94, V:E.94, V:E.127 FE2.96: 4 residues within 4Å: Chain W: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain W Metal complexes: W:E.18, W:E.18, W:E.51, W:H.54, W:E.127 FE2.97: 4 residues within 4Å: Chain W: E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain W Metal complexes: W:E.51, W:E.94, W:E.94, W:E.127 FE2.98: 8 residues within 4Å: Chain I: N.148, Q.151 Chain N: N.148, Q.151 Chain O: N.148, Q.151 Chain X: N.148, Q.151 No protein-ligand interaction detected (PLIP) FE2.102: 5 residues within 4Å: Chain X: E.18, E.51, H.54, I.123, E.127 5 PLIP interactions: 5 interactions with chain X Metal complexes: X:E.18, X:E.18, X:E.51, X:H.54, X:E.127 FE2.103: 4 residues within 4Å: Chain X: E.51, E.94, E.127, H.130 5 PLIP interactions: 3 interactions with chain X, 2 Ligand-Water interactions Metal complexes: X:E.51, X:E.94, X:E.127, H2O.96, H2O.96

39 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.3: 1 residues within 4Å: Chain P: D.34 No protein-ligand interaction detected (PLIP) MG.4: 5 residues within 4Å: Chain A: E.118 Chain M: E.118, E.121 Chain O: E.118, E.121 5 PLIP interactions: 2 interactions with chain O, 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: O:E.118, O:E.118, A:E.118, H2O.51, H2O.59 MG.8: 1 residues within 4Å: Chain D: D.34 No protein-ligand interaction detected (PLIP) MG.12: 6 residues within 4Å: Chain B: E.118, E.121 Chain C: E.118, E.121 Chain F: E.118, E.121 3 PLIP interactions: 2 interactions with chain F, 1 interactions with chain C Metal complexes: F:E.118, F:E.118, C:E.118 MG.13: 2 residues within 4Å: Chain C: D.132 Chain E: D.34 No protein-ligand interaction detected (PLIP) MG.16: 8 residues within 4Å: Chain D: E.118, E.121 Chain L: E.118, E.121 Chain T: E.118, E.121 Ligands: MG.51, MG.86 No protein-ligand interaction detected (PLIP) MG.17: 2 residues within 4Å: Chain C: D.34 Chain T: D.132 No protein-ligand interaction detected (PLIP) MG.21: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.25: 1 residues within 4Å: Chain F: D.132 No protein-ligand interaction detected (PLIP) MG.29: 2 residues within 4Å: Chain H: E.81, E.85 4 PLIP interactions: 1 interactions with chain H, 3 Ligand-Water interactions Metal complexes: H:E.85, H2O.29, H2O.29, H2O.31 MG.30: 1 residues within 4Å: Chain G: E.85 3 PLIP interactions: 1 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:E.85, H2O.26, H2O.26 MG.31: 1 residues within 4Å: Chain G: D.132 No protein-ligand interaction detected (PLIP) MG.34: 1 residues within 4Å: Chain P: D.132 No protein-ligand interaction detected (PLIP) MG.38: 1 residues within 4Å: Chain X: D.34 No protein-ligand interaction detected (PLIP) MG.39: 5 residues within 4Å: Chain I: E.118 Chain U: E.118, E.121 Chain W: E.118, E.121 5 PLIP interactions: 1 interactions with chain I, 2 interactions with chain W, 2 Ligand-Water interactions Metal complexes: I:E.118, W:E.118, W:E.118, H2O.83, H2O.91 MG.43: 1 residues within 4Å: Chain L: D.34 No protein-ligand interaction detected (PLIP) MG.47: 6 residues within 4Å: Chain J: E.118, E.121 Chain K: E.118, E.121 Chain N: E.118, E.121 3 PLIP interactions: 1 interactions with chain K, 2 interactions with chain N Metal complexes: K:E.118, N:E.118, N:E.118 MG.48: 2 residues within 4Å: Chain K: D.132 Chain M: D.34 No protein-ligand interaction detected (PLIP) MG.51: 8 residues within 4Å: Chain D: E.118, E.121 Chain L: E.118, E.121 Chain T: E.118, E.121 Ligands: MG.16, MG.86 No protein-ligand interaction detected (PLIP) MG.52: 2 residues within 4Å: Chain D: D.132 Chain K: D.34 No protein-ligand interaction detected (PLIP) MG.56: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.60: 1 residues within 4Å: Chain N: D.132 No protein-ligand interaction detected (PLIP) MG.64: 2 residues within 4Å: Chain P: E.81, E.85 4 PLIP interactions: 1 interactions with chain P, 3 Ligand-Water interactions Metal complexes: P:E.85, H2O.61, H2O.61, H2O.63 MG.65: 1 residues within 4Å: Chain O: E.85 3 PLIP interactions: 1 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:E.85, H2O.58, H2O.58 MG.66: 1 residues within 4Å: Chain O: D.132 No protein-ligand interaction detected (PLIP) MG.69: 1 residues within 4Å: Chain X: D.132 No protein-ligand interaction detected (PLIP) MG.73: 1 residues within 4Å: Chain H: D.34 No protein-ligand interaction detected (PLIP) MG.74: 5 residues within 4Å: Chain E: E.118, E.121 Chain G: E.118, E.121 Chain Q: E.118 5 PLIP interactions: 1 interactions with chain Q, 2 interactions with chain G, 2 Ligand-Water interactions Metal complexes: Q:E.118, G:E.118, G:E.118, H2O.19, H2O.27 MG.78: 1 residues within 4Å: Chain T: D.34 No protein-ligand interaction detected (PLIP) MG.82: 6 residues within 4Å: Chain R: E.118, E.121 Chain S: E.118, E.121 Chain V: E.118, E.121 3 PLIP interactions: 1 interactions with chain S, 2 interactions with chain V Metal complexes: S:E.118, V:E.118, V:E.118 MG.83: 2 residues within 4Å: Chain S: D.132 Chain U: D.34 No protein-ligand interaction detected (PLIP) MG.86: 8 residues within 4Å: Chain D: E.118, E.121 Chain L: E.118, E.121 Chain T: E.118, E.121 Ligands: MG.16, MG.51 No protein-ligand interaction detected (PLIP) MG.87: 2 residues within 4Å: Chain L: D.132 Chain S: D.34 No protein-ligand interaction detected (PLIP) MG.91: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.95: 1 residues within 4Å: Chain V: D.132 No protein-ligand interaction detected (PLIP) MG.99: 2 residues within 4Å: Chain X: E.81, E.85 4 PLIP interactions: 1 interactions with chain X, 3 Ligand-Water interactions Metal complexes: X:E.85, H2O.93, H2O.93, H2O.95 MG.100: 1 residues within 4Å: Chain W: E.85 3 PLIP interactions: 1 interactions with chain W, 2 Ligand-Water interactions Metal complexes: W:E.85, H2O.90, H2O.90 MG.101: 1 residues within 4Å: Chain W: D.132 No protein-ligand interaction detected (PLIP) MG.104: 1 residues within 4Å: Chain H: D.132 No protein-ligand interaction detected (PLIP)

12 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.9: 18 residues within 4Å: Chain A: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 Chain B: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59, L.71 19 PLIP interactions: 7 interactions with chain A, 12 interactions with chain B, Hydrophobic interactions: A:L.19, A:F.26, A:F.26, A:F.26, A:I.49, A:M.52, B:L.19, B:I.22, B:I.22, B:F.26, B:F.26, B:F.26, B:I.49, B:I.49, B:M.52, B:I.59, B:L.71 Salt bridges: A:K.53, B:K.53 HEM.18: 19 residues within 4Å: Chain C: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 Chain D: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 18 PLIP interactions: 10 interactions with chain C, 8 interactions with chain D, Hydrophobic interactions: C:L.19, C:I.22, C:I.22, C:F.26, C:I.49, C:I.49, C:M.52, C:A.55, C:I.59, D:L.19, D:I.22, D:F.26, D:F.26, D:I.49, D:M.52, D:L.71 Salt bridges: C:K.53, D:K.53 HEM.22: 17 residues within 4Å: Chain E: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59 Chain F: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 14 PLIP interactions: 7 interactions with chain F, 7 interactions with chain E, Hydrophobic interactions: F:L.19, F:I.22, F:I.22, F:F.26, F:I.49, F:M.52, E:L.19, E:I.22, E:F.26, E:I.49, E:M.52, E:I.59 Salt bridges: F:K.53, E:K.53 HEM.35: 19 residues within 4Å: Chain G: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 Chain H: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 18 PLIP interactions: 8 interactions with chain G, 10 interactions with chain H, Hydrophobic interactions: G:L.19, G:I.22, G:F.26, G:I.49, G:M.52, G:L.71, H:L.19, H:I.22, H:I.22, H:F.26, H:I.49, H:I.49, H:M.52, H:A.55, H:I.59 Water bridges: G:Y.45 Salt bridges: G:K.53, H:K.53 HEM.44: 18 residues within 4Å: Chain I: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 Chain J: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59, L.71 19 PLIP interactions: 7 interactions with chain I, 12 interactions with chain J, Hydrophobic interactions: I:L.19, I:F.26, I:F.26, I:F.26, I:I.49, I:M.52, J:L.19, J:I.22, J:I.22, J:F.26, J:F.26, J:F.26, J:I.49, J:I.49, J:M.52, J:I.59, J:L.71 Salt bridges: I:K.53, J:K.53 HEM.53: 19 residues within 4Å: Chain K: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 Chain L: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 18 PLIP interactions: 8 interactions with chain L, 10 interactions with chain K, Hydrophobic interactions: L:L.19, L:I.22, L:F.26, L:F.26, L:I.49, L:M.52, L:L.71, K:L.19, K:I.22, K:I.22, K:F.26, K:I.49, K:I.49, K:M.52, K:A.55, K:I.59 Salt bridges: L:K.53, K:K.53 HEM.57: 17 residues within 4Å: Chain M: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59 Chain N: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 14 PLIP interactions: 7 interactions with chain N, 7 interactions with chain M, Hydrophobic interactions: N:L.19, N:I.22, N:I.22, N:F.26, N:I.49, N:M.52, M:L.19, M:I.22, M:F.26, M:I.49, M:M.52, M:I.59 Salt bridges: N:K.53, M:K.53 HEM.70: 19 residues within 4Å: Chain O: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 Chain P: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 18 PLIP interactions: 10 interactions with chain P, 8 interactions with chain O, Hydrophobic interactions: P:L.19, P:I.22, P:I.22, P:F.26, P:I.49, P:I.49, P:M.52, P:A.55, P:I.59, O:L.19, O:I.22, O:F.26, O:I.49, O:M.52, O:L.71 Salt bridges: P:K.53, O:K.53 Water bridges: O:Y.45 HEM.79: 18 residues within 4Å: Chain Q: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 Chain R: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59, L.71 19 PLIP interactions: 12 interactions with chain R, 7 interactions with chain Q, Hydrophobic interactions: R:L.19, R:I.22, R:I.22, R:F.26, R:F.26, R:F.26, R:I.49, R:I.49, R:M.52, R:I.59, R:L.71, Q:L.19, Q:F.26, Q:F.26, Q:F.26, Q:I.49, Q:M.52 Salt bridges: R:K.53, Q:K.53 HEM.88: 19 residues within 4Å: Chain S: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 Chain T: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 18 PLIP interactions: 8 interactions with chain T, 10 interactions with chain S, Hydrophobic interactions: T:L.19, T:I.22, T:F.26, T:F.26, T:I.49, T:M.52, T:L.71, S:L.19, S:I.22, S:I.22, S:F.26, S:I.49, S:I.49, S:M.52, S:A.55, S:I.59 Salt bridges: T:K.53, S:K.53 HEM.92: 17 residues within 4Å: Chain U: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59 Chain V: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 14 PLIP interactions: 7 interactions with chain V, 7 interactions with chain U, Hydrophobic interactions: V:L.19, V:I.22, V:I.22, V:F.26, V:I.49, V:M.52, U:L.19, U:I.22, U:F.26, U:I.49, U:M.52, U:I.59 Salt bridges: V:K.53, U:K.53 HEM.105: 19 residues within 4Å: Chain W: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 Chain X: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 18 PLIP interactions: 8 interactions with chain W, 10 interactions with chain X, Hydrophobic interactions: W:L.19, W:I.22, W:F.26, W:I.49, W:M.52, W:L.71, X:L.19, X:I.22, X:I.22, X:F.26, X:I.49, X:I.49, X:M.52, X:A.55, X:I.59 Water bridges: W:Y.45 Salt bridges: W:K.53, X:K.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Swartz, L. et al., Redox-Dependent Structural Changes in the Azotobacter vinelandii Bacterioferritin: New Insights into the Ferroxidase and Iron Transport Mechanism(,). Biochemistry (2006)

Release Date

2006-04-04

Peptides

Bacterioferritin: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
A

J
B

K
C

L
D

M
E

N
F

O
G

P
H

Q
A

R
B

S
C

T
D

U
E

V
F

W
G

X
H

Bacterioferritin

Related Entries With Identical Sequence