SMTL ID : 2fs9.1

Human beta tryptase II with inhibitor CRA-28427

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

4 x C4A: ETHYL {(1S)-5-AMINO-1-[(5-{4-[(2,3-DIHYDRO-1H-INDEN-2-YLAMINO)CARBONYL]BENZYL}-1,2,4-OXADIAZOL-3-YL)CARBONYL]PENTYL}CARBAMATE(Covalent)

C4A.1: 19 residues within 4Å: Chain A: F.28, H.44, C.45, K.51, D.52, A.55, L.56, A.86, D.188, S.189, C.190, Q.191, G.192, D.193, S.194, V.212, S.213, W.214, G.225 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:F.28, A:F.28, A:K.51, A:K.51, A:A.55, A:L.56, A:A.86 Hydrogen bonds: A:C.45, A:S.189, A:S.189, A:Q.191, A:G.192, A:D.193, A:S.194, A:S.194, A:S.213 Water bridges: A:S.189, A:A.219 C4A.2: 20 residues within 4Å: Chain B: V.20, F.28, H.44, C.45, K.51, D.52, A.55, A.86, Q.87, D.188, S.189, C.190, Q.191, G.192, D.193, S.194, V.212, S.213, W.214, G.225 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:V.20, B:F.28, B:K.51, B:K.51, B:A.55, B:A.86 Hydrogen bonds: B:C.45, B:S.189, B:S.189, B:Q.191, B:G.192, B:D.193, B:S.194, B:S.194, B:S.213 Water bridges: B:S.189 C4A.3: 19 residues within 4Å: Chain C: F.28, H.44, C.45, K.51, D.52, A.86, Q.87, D.188, S.189, C.190, Q.191, G.192, D.193, S.194, V.212, S.213, W.214, G.217, G.225 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:F.28, C:K.51, C:K.51, C:A.86 Hydrogen bonds: C:C.45, C:S.189, C:S.189, C:Q.191, C:G.192, C:D.193, C:S.194, C:S.194, C:S.213 Water bridges: C:G.215 C4A.4: 19 residues within 4Å: Chain D: V.20, F.28, H.44, C.45, K.51, D.52, A.55, D.188, S.189, C.190, Q.191, G.192, D.193, S.194, V.212, S.213, W.214, G.217, G.225 16 PLIP interactions: 16 interactions with chain D Hydrophobic interactions: D:V.20, D:F.28, D:F.28, D:K.51, D:K.51, D:A.55 Hydrogen bonds: D:C.45, D:D.188, D:S.189, D:Q.191, D:G.192, D:D.193, D:S.194, D:S.194, D:S.213 Water bridges: D:I.226

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McGrath, M.E. et al., Structure-guided design of Peptide-based tryptase inhibitors. Biochemistry (2006)

Release Date

2006-03-07

Peptides

Tryptase beta-2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Tryptase beta-2

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