SMTL ID : 2g1m.1

Cellular Oxygen Sensing: Crystal Structure of Hypoxia-Inducible Factor Prolyl Hydroxylase (PHD2)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x FE2: FE (II) ION(Non-covalent)

FE2.1: 4 residues within 4Å: Chain A: H.133, D.135, H.194 Ligands: 4HG.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.133, A:D.135, A:H.194, H2O.1

1 x 4HG: N-[(4-HYDROXY-8-IODOISOQUINOLIN-3-YL)CARBONYL]GLYCINE(Non-covalent)

4HG.2: 15 residues within 4Å: Chain A: D.74, I.76, M.119, Y.123, Y.130, H.133, D.135, I.147, Y.149, L.163, H.194, V.196, R.203, A.205 Ligands: FE2.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.76 Hydrogen bonds: A:Y.123 Water bridges: A:T.207, A:T.207 Salt bridges: A:R.203 pi-Stacking: A:Y.130, A:Y.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McDonough, M.A. et al., Cellular oxygen sensing: Crystal structure of hypoxia-inducible factor prolyl hydroxylase (PHD2). Proc.Natl.Acad.Sci.Usa (2006)

Release Date

2006-06-13

Peptides

Egl nine homolog 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Egl nine homolog 1

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