SMTL ID : 2g22.3 (2 other biounits)

Ketopiperazine-Based Renin Inhibitors: Optimization of the "C" Ring

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-trimer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: N.68, G.69, T.70, R.132 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:N.68 Hydrogen bonds: A:T.70 NAG.3: 4 residues within 4Å: Chain B: N.68, G.69, T.70, R.132 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:N.68 Hydrogen bonds: B:T.70, B:T.70 NAG.5: 4 residues within 4Å: Chain C: N.68, G.69, T.70, R.132 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:N.68 Hydrogen bonds: C:T.70

3 x 6IG: 6-ETHYL-5-[1-(3-METHOXYPROPYL)-1,2,3,4-TETRAHYDROQUINOLIN-7-YL]-N~4~-(2-PHENYLETHYL)PYRIMIDINE-2,4-DIAMINE(Non-covalent)

6IG.2: 20 residues within 4Å: Chain A: T.11, Q.12, Y.13, V.29, D.31, G.33, Y.76, S.77, T.78, P.111, A.115, F.117, V.120, D.219, T.220, G.221, A.222, S.223, Y.224, M.296 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Q.12, A:V.29, A:T.78, A:V.120, A:A.222, A:Y.224 Hydrogen bonds: A:Y.13, A:G.33, A:T.78 Salt bridges: A:D.31, A:D.219 pi-Stacking: A:Y.76 6IG.4: 20 residues within 4Å: Chain B: T.11, Q.12, Y.13, V.29, D.31, G.33, Y.76, S.77, T.78, P.111, A.115, F.117, V.120, D.219, T.220, G.221, A.222, S.223, Y.224, M.296 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:Q.12, B:V.29, B:T.78, B:V.120, B:A.222, B:Y.224 Hydrogen bonds: B:Y.13, B:G.33, B:T.78 Salt bridges: B:D.31, B:D.219 pi-Stacking: B:Y.76 6IG.6: 20 residues within 4Å: Chain C: T.11, Q.12, Y.13, V.29, D.31, G.33, Y.76, S.77, T.78, P.111, A.115, F.117, V.120, D.219, T.220, G.221, A.222, S.223, Y.224, M.296 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:Q.12, C:V.29, C:T.78, C:V.120, C:A.222, C:Y.224 Hydrogen bonds: C:Y.13, C:G.33, C:T.78 Salt bridges: C:D.31, C:D.219 pi-Stacking: C:Y.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Holsworth, D.D. et al., Ketopiperazine-Based Renin Inhibitors: Optimization of the "C" Ring. BIOORG.MED.CHEM.LETT. (2006)

Release Date

2006-06-13

Peptides

Renin: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

Renin

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