SMTL ID : 2g43.2 (1 other biounit)

Structure of the ZNF UBP domain from deubiquitinating enzyme isopeptidase T (IsoT)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.37, C.40, C.57, H.70 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.37, A:C.40, A:C.57, A:H.70

3 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 4 residues within 4Å: Chain A: G.58, R.59 Ligands: UNX.3, UNX.4 No protein-ligand interaction detected (PLIP) UNX.3: 5 residues within 4Å: Chain A: W.47, Y.97, Y.99 Ligands: UNX.2, UNX.4 No protein-ligand interaction detected (PLIP) UNX.4: 7 residues within 4Å: Chain A: G.58, R.59, A.71, V.72, Y.99 Ligands: UNX.2, UNX.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reyes-Turcu, F.E. et al., The Ubiquitin Binding Domain ZnF UBP Recognizes the C-Terminal Diglycine Motif of Unanchored Ubiquitin. Cell(Cambridge,Mass.) (2006)

Release Date

2006-04-04

Peptides

Ubiquitin carboxyl-terminal hydrolase 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ubiquitin carboxyl-terminal hydrolase 5

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