SMTL ID : 2gwk.1

SpvB ADP-ribosylated actin: orthorhombic crystal form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x CA: CALCIUM ION(Non-functional Binders)

CA.1: 1 residues within 4Å: Ligands: ATP.2 No protein-ligand interaction detected (PLIP) CA.3: 1 residues within 4Å: Ligands: ATP.4 No protein-ligand interaction detected (PLIP)

2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 22 residues within 4Å: Chain A: G.9, S.10, G.11, L.12, K.14, G.70, G.152, D.153, G.154, V.155, G.178, R.179, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 Ligands: CA.1 25 PLIP interactions: 25 interactions with chain A Hydrogen bonds: A:S.10, A:S.10, A:G.11, A:L.12, A:G.152, A:D.153, A:D.153, A:G.154, A:V.155, A:V.155, A:K.209, A:E.210, A:G.298 Water bridges: A:K.14, A:K.14, A:Q.133, A:D.150, A:D.150, A:D.150, A:D.153, A:G.178, A:K.332 Salt bridges: A:K.14, A:K.14 pi-Stacking: A:Y.302 ATP.4: 22 residues within 4Å: Chain B: G.9, S.10, G.11, L.12, K.14, G.70, G.152, D.153, G.154, V.155, G.178, R.179, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 Ligands: CA.3 28 PLIP interactions: 28 interactions with chain B Hydrogen bonds: B:S.10, B:G.11, B:L.12, B:D.153, B:D.153, B:D.153, B:G.154, B:V.155, B:V.155, B:K.209, B:E.210, B:E.210, B:G.298, B:T.299, B:K.332 Water bridges: B:K.14, B:K.14, B:Q.133, B:D.150, B:D.150, B:G.152, B:R.206, B:E.210, B:E.210, B:Y.302 Salt bridges: B:K.14, B:K.14 pi-Stacking: B:Y.302

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Margarit, S.M. et al., A steric antagonism of actin polymerization by a salmonella virulence protein. Structure (2006)

Release Date

2006-08-29

Peptides

Actin, alpha skeletal muscle: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Actin, alpha skeletal muscle

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