SMTL ID : 5zzb.2 (1 other biounit)

LokiProfilin2/Rabbit Actin Complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x LAB: LATRUNCULIN B(Non-covalent)

LAB.1: 15 residues within 4Å: Chain A: G.11, L.12, P.28, I.30, Q.55, Y.65, D.153, G.178, R.179, T.182, R.202, E.203, R.206, K.209 Ligands: ATP.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.28, A:I.30, A:Y.65, A:E.203 Hydrogen bonds: A:Y.65, A:D.153, A:T.182, A:R.206, A:K.209 Salt bridges: A:R.206

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 23 residues within 4Å: Chain A: G.9, S.10, G.11, L.12, K.14, G.70, G.152, D.153, G.154, V.155, G.178, R.179, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 Ligands: LAB.1, CA.3 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:S.10, A:S.10, A:G.11, A:L.12, A:G.152, A:D.153, A:D.153, A:G.154, A:V.155, A:V.155, A:K.209, A:E.210, A:E.210, A:G.298, A:T.299 Water bridges: A:K.14, A:K.332 Salt bridges: A:K.14, A:K.14 pi-Stacking: A:Y.302

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 2 residues within 4Å: Chain A: Q.133 Ligands: ATP.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Akil, C. et al., Genomes of Asgard archaea encode profilins that regulate actin. Nature (2018)

Release Date

2018-10-10

Peptides

Actin, alpha skeletal muscle: A
Uncharacterized protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
C

Actin, alpha skeletal muscle

Uncharacterized protein

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