SMTL ID : 2hj4.1

Crystal structure of Alcaligenes faecalis AADH complex with p-nitrobenzylamine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-oligomer

Ligands

4 x PNZ: P-NITRO-BENZYLAMINE(Non-covalent)

PNZ.1: 13 residues within 4Å: Chain A: D.37, W.62, N.109, D.110, V.111, N.112 Chain D: F.25, L.28, F.51, N.52, Q.105, G.106, L.107 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain D Hydrophobic interactions: A:N.112, D:L.28, D:L.107 Hydrogen bonds: A:N.109 Water bridges: A:W.113 pi-Stacking: D:F.25 PNZ.2: 9 residues within 4Å: Chain A: D.37, N.94 Chain D: Y.256, L.308, D.323, G.324, A.349, S.350, L.351 6 PLIP interactions: 3 interactions with chain D, 3 interactions with chain A Hydrophobic interactions: D:L.308, D:L.351, D:L.351 Hydrogen bonds: A:D.37 Water bridges: A:D.37, A:N.94 PNZ.3: 13 residues within 4Å: Chain B: D.37, W.62, N.109, V.111, N.112, F.122 Chain C: F.25, L.28, F.51, N.52, Q.105, G.106, L.107 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain C Hydrophobic interactions: B:N.112, B:F.122, C:L.107 Hydrogen bonds: B:N.109 pi-Stacking: C:F.25 PNZ.4: 9 residues within 4Å: Chain B: D.37, N.94 Chain C: Y.256, L.308, D.323, G.324, A.349, S.350, L.351 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain C Hydrogen bonds: B:D.37 Water bridges: B:N.94 Hydrophobic interactions: C:L.308, C:L.351, C:L.351

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hothi, P. et al., Isotope effects reveal that para-substituted benzylamines are poor reactivity probes of the quinoprotein mechanism for aromatic amine dehydrogenase. Biochemistry (2007)

Release Date

2007-11-06

Peptides

Aromatic amine dehydrogenase; chain D, H: AB
Aromatic amine dehydrogenase; chain A, B: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
H

C
A

D
B

Aromatic amine dehydrogenase; chain D, H

Aromatic amine dehydrogenase; chain A, B

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