SMTL ID : 2hot.1

Phage selected homeodomain bound to modified DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

homo-dimer

Ligands

1 x P2O: 3-PROP-2-YN-1-YL-1,3-OXAZOLIDIN-2-ONE(Non-covalent)

P2O.1: 6 residues within 4Å: Chain A: A.13, T.14 Chain C: A.46, K.49, G.50, K.53 No protein-ligand interaction detected (PLIP)

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain D: L.43, N.44 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:L.43 GOL.3: 3 residues within 4Å: Chain D: S.12, E.14, Q.15 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:S.12, D:S.12 Water bridges: D:E.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Simon, M.D. et al., Structure and properties of a re-engineered homeodomain protein-DNA interface. Acs Chem.Biol. (2006)

Release Date

2006-12-12

Peptides

Segmentation polarity homeobox protein engrailed: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

D
B

Segmentation polarity homeobox protein engrailed

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