SMTL ID : 2in4.1

Crystal Structure of Myoglobin with Charge Neutralized Heme, ZnDMb-dme

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: T.51, E.52 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.52 Water bridges: A:A.53

1 x HE5: ZINC(II)-DEUTEROPORPHYRIN DIMETHYLESTER(Non-covalent)

HE5.2: 17 residues within 4Å: Chain A: K.42, F.43, K.45, F.46, H.64, V.67, V.68, A.71, P.88, L.89, S.92, H.93, H.97, I.99, L.104, I.107, F.138 14 PLIP interactions: 14 interactions with chain A, Hydrophobic interactions: A:F.43, A:F.43, A:V.67, A:V.68, A:I.99, A:I.99, A:L.104, A:I.107, A:F.138 Hydrogen bonds: A:S.92 Salt bridges: A:H.64 pi-Stacking: A:H.64, A:H.97 Metal complexes: A:H.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wheeler, K.E. et al., Dynamic docking of cytochrome b5 with myoglobin and alpha-hemoglobin: heme-neutralization "squares" and the binding of electron-transfer-reactive configurations. J.Am.Chem.Soc. (2007)

Release Date

2006-10-31

Peptides

Myoglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myoglobin

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