- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 2 x GGA: D-GAMMA-GLUTAMYL-N-{[(R)-{4-[(4-AMINOBUTYL)AMINO]BUTYL}(PHOSPHONOOXY)PHOSPHORYL]METHYL}-D-ALANINAMIDE(Non-covalent)
GGA.3: 26 residues within 4Å:- Chain A: N.241, R.316, D.318, E.330, N.332, S.335, A.336, S.337, E.341, D.387, E.391, E.392, T.441, W.442, A.443, T.446, R.538, C.539, R.598, K.607, E.608, S.609, D.610
- Ligands: MG.1, MG.2, ADP.4
23 PLIP interactions:23 interactions with chain A- Hydrophobic interactions: A:A.443
- Hydrogen bonds: A:N.241, A:R.316, A:R.316, A:N.332, A:S.335, A:S.335, A:S.337, A:S.337, A:D.387, A:D.387, A:E.391, A:A.443, A:T.446, A:T.446, A:R.538, A:C.539, A:D.610, A:D.610
- Water bridges: A:Y.394, A:R.598, A:R.598
- Salt bridges: A:R.316
GGA.7: 24 residues within 4Å:- Chain B: R.316, D.318, E.330, N.332, S.335, A.336, S.337, E.341, D.387, E.391, E.392, T.441, W.442, A.443, T.446, R.538, C.539, R.598, K.607, S.609, D.610
- Ligands: MG.5, MG.6, ADP.8
20 PLIP interactions:20 interactions with chain B- Hydrophobic interactions: B:A.443
- Hydrogen bonds: B:R.316, B:R.316, B:E.330, B:N.332, B:S.335, B:S.335, B:S.337, B:D.387, B:D.387, B:E.391, B:A.443, B:A.443, B:C.539, B:D.610
- Water bridges: B:S.335, B:Q.582, B:Q.582, B:K.607
- Salt bridges: B:R.316
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.4: 24 residues within 4Å:- Chain A: D.318, Y.329, E.330, K.498, A.531, K.533, R.538, C.539, G.540, I.543, L.545, Q.568, Q.569, L.570, W.571, C.572, L.573, Q.582, L.603, V.604, I.605
- Ligands: MG.1, MG.2, GGA.3
17 PLIP interactions:17 interactions with chain A- Hydrogen bonds: A:D.318, A:K.533, A:C.539, A:G.540, A:S.541, A:Q.568, A:Q.569, A:W.571, A:Q.582, A:I.605
- Water bridges: A:R.538, A:I.605
- Salt bridges: A:K.498, A:K.498, A:K.533
- pi-Stacking: A:Y.329, A:Y.329
ADP.8: 24 residues within 4Å:- Chain B: D.318, Y.329, E.330, K.498, L.515, A.531, K.533, G.537, R.538, C.539, G.540, Q.568, Q.569, L.570, W.571, C.572, L.573, Q.582, L.603, V.604, I.605
- Ligands: MG.5, MG.6, GGA.7
14 PLIP interactions:14 interactions with chain B- Hydrogen bonds: B:E.330, B:K.533, B:C.539, B:G.540, B:Q.568, B:Q.569, B:W.571, B:Q.582, B:I.605
- Water bridges: B:R.538
- Salt bridges: B:K.498, B:K.498, B:K.533
- pi-Stacking: B:Y.329
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pai, C.H. et al., Dual binding sites for translocation catalysis by Escherichia coli glutathionylspermidine synthetase. Embo J. (2006)
- Release Date
- 2006-12-12
- Peptides
- Bifunctional glutathionylspermidine synthetase/amidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 2 x GGA: D-GAMMA-GLUTAMYL-N-{[(R)-{4-[(4-AMINOBUTYL)AMINO]BUTYL}(PHOSPHONOOXY)PHOSPHORYL]METHYL}-D-ALANINAMIDE(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pai, C.H. et al., Dual binding sites for translocation catalysis by Escherichia coli glutathionylspermidine synthetase. Embo J. (2006)
- Release Date
- 2006-12-12
- Peptides
- Bifunctional glutathionylspermidine synthetase/amidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B